Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00621 ATGTCTCATATTGCTGTGGAGAGAAACAGACGAAGACAGATGAATGAACATCTCAAAGTTCTCCGATCTTTAACCCCATGCTTCTACATCAAAAGGGGAGATCAAGCGTCGATAATAGCAGGGGTGATAGATTTCATCAAAGAGCTACACCAAGTTCTGCAATCGTTAGAGTCCAAAAAGCGAAGGAACAGTCTAAGCCCTAGCCCTAATCCAAGTCCAAAGCCTCAACAGTCAAATAACTCTCAGCTCGATCCTCCATTCGGGTCTGAAAGTACAAAGGAAATCGCAGGAGCAAGCTGCAATTCGGCCATTGCAGACGTCGAAGCAAGGATTTCTGGACCAAACGTGGTGTTGAAGATCATCTGCCGACGATTCCCCGGTCAACTCGTGAGGATTGTAAGCGTTTTAGAGAAACTCTCCTTTGAAATCCTCCATCTCAACATCAGTACCATGGAAGATACTGTTCTTTACTCTTTTCTCGTTAAGATAGGTCTGGAATGTGAACTGAGCCTGGAAGAACTAGCTATGGAAGTTCAGCAAAGTTTTTCGTCTGAACACATCTACGTCAACAAAATTTAG 579 43.87 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIAGVIDFIKELHQVLQSLESKKRRNSLSPSPNPSPKPQQSNNSQLDPPFGSESTKEIAGASCNSAIADVEARISGPNVVLKIICRRFPGQLVRIVSVLEKLSFEILHLNISTMEDTVLYSFLVKIGLECELSLEELAMEVQQSFSSEHIYVNKI 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13181067 13182178 + Bpe010321.1 Bpe13g00621 113401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00621 192 Gene3D - 1 64 IPR036638 GO:0046983
Bpe13g00621 192 PANTHER TRANSCRIPTION FACTOR MUTE 1 190 - -
Bpe13g00621 192 MobiDBLite consensus disorder prediction 75 93 - -
Bpe13g00621 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Bpe13g00621 192 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Bpe13g00621 192 SUPERFAMILY ACT-like 115 173 IPR045865 -
Bpe13g00621 192 SMART finulus 4 55 IPR011598 GO:0046983
Bpe13g00621 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 71 IPR036638 GO:0046983
Bpe13g00621 192 MobiDBLite consensus disorder prediction 58 93 - -
Bpe13g00621 192 PANTHER TRANSCRIPTION FACTOR FAMA 1 190 IPR044283 GO:0003700|GO:0010052
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00175 Bpe-Chr3:2188247 Bpe13g00621 Bpe-Chr13:13181067 1.28E-43 dispersed
Bpe03g00243 Bpe-Chr3:3223273 Bpe13g00621 Bpe-Chr13:13181067 2.89E-47 dispersed
Bpe13g00621 Bpe-Chr13:13181067 Bpe14g00842 Bpe-Chr14:6318173 4.00E-51 dispersed
Bpe13g00621 Bpe-Chr13:13181067 Bpe12g00372 Bpe-Chr12:8995190 2.80E-59 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22300 PF00010 HLH 4.30E-08 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00621 - - vvi:100256370 271.552