Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00630 ATGGGCTGCGTACATGGAAAATGTTGCAGTCGGTACCCTTCCTCGTCGGACGGAGACTCGCCAGAGTTGCTAGAAACCGGTCCTCTTAGTCTGGTAGGGAAACACATTTTGACAGAGAGATCGTTGGAGATTGTTTCTGTTCCGTCGCACGATTACCATTTGGAATTCTCTGTTATTTCGCACCGAGGCTATTACCCAGATTCCCCCGATAAACAAAACCAAGATAGTTTCTGTGTAAGAACTCAAATCCAAGGTGACCCAAGTATTCATTTCTTCGGCGTTTTTGATGGGCACGGCCAATTCGGTGCAGAGTGTTCTAATTTCGTCAAAGATAGGCTTGTGGAGATACTATCAAACGACCCCACATTGTTGAACGATCCAGTAAAAGCCTTCAATCAGGCATTTTCAACAACGAATCACGAACTACACGAAAGTGAAATTGACGATTCATTAAGTGGCACGACAGCAATCACTGCGCTTGTGATTGGAGAAACCCTTTTCGTTGCAAATGTGGGTGATTCTAGGGCGGTGATTGCCGTTAAAGAAGGGAATCAAATTATCGCCGAAGATCTTTCAAAAGATCAAACACCATTTAGGAAGGATGAGTATAAGAGGGTAAAGCTCTGTGGAGCAAGGGTTTTGAGTGTCGATCAAGTGGAAGGATTGAAGGATCCTGATGTTCAGAGCTGGGGTGATGAAGAAAGTCAAGGGGGTGATCCTCCGCGCTTGTGGGTCCAGGGCGGGATGTACCCCGGGACTGCATTTACAAGGAGTGTGGGAGATAGTATAGCTGAGGGCATTGGTGTTATTGCAGAGCCTGAAGTGTCAATGATTCAGCTGACTCTTAATCATCTTTTCTTTGTTGTGGCAAGTGATGGAGTGTTTGAGTTCCTCTCTAGCCAAACTGTCATAGACATGGCGTCAAGATATACAGATCCTCGCGATGCCTGCTCTGCAATAGCTGGAGAATCGTACAGACTATGGCTGGAACACGAAAACCGGACTGATGATATAACGATGATCGTCATTCATATCAAAGGCTTGTCTAATTCAGGTGCCATTGTTGGTGCTGCCTCTAACACGATGAGAACTAGGCCAGGGAAAGGAACATCTGGTAGGTCCGAATTTTATCGTTCAGCAAGAAGTGACTTTTCTGATCTACCAACTTCTCATCGTGTGTCGACAACAAATCGTAGCGTTATACCATCTCCAACACATCACAGACCTTTGGTGGTGGGTCATTAA 1245 45.62 MGCVHGKCCSRYPSSSDGDSPELLETGPLSLVGKHILTERSLEIVSVPSHDYHLEFSVISHRGYYPDSPDKQNQDSFCVRTQIQGDPSIHFFGVFDGHGQFGAECSNFVKDRLVEILSNDPTLLNDPVKAFNQAFSTTNHELHESEIDDSLSGTTAITALVIGETLFVANVGDSRAVIAVKEGNQIIAEDLSKDQTPFRKDEYKRVKLCGARVLSVDQVEGLKDPDVQSWGDEESQGGDPPRLWVQGGMYPGTAFTRSVGDSIAEGIGVIAEPEVSMIQLTLNHLFFVVASDGVFEFLSSQTVIDMASRYTDPRDACSAIAGESYRLWLEHENRTDDITMIVIHIKGLSNSGAIVGAASNTMRTRPGKGTSGRSEFYRSARSDFSDLPTSHRVSTTNRSVIPSPTHHRPLVVGH 414
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13235524 13237537 - Bpe010329.1 Bpe13g00630 113410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00630 414 MobiDBLite consensus disorder prediction 224 243 - -
Bpe13g00630 414 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Bpe13g00630 414 CDD PP2Cc 61 345 IPR001932 -
Bpe13g00630 414 MobiDBLite consensus disorder prediction 383 403 - -
Bpe13g00630 414 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 29 407 - -
Bpe13g00630 414 MobiDBLite consensus disorder prediction 383 414 - -
Bpe13g00630 414 Pfam Protein phosphatase 2C 83 321 IPR001932 -
Bpe13g00630 414 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Bpe13g00630 414 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 29 407 - -
Bpe13g00630 414 Gene3D - 41 347 IPR036457 -
Bpe13g00630 414 SMART PP2C_4 55 343 IPR001932 -
Bpe13g00630 414 SUPERFAMILY PP2C-like 41 347 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00490 Bpe-Chr8:3190605 Bpe13g00630 Bpe-Chr13:13235524 3.65E-135 dispersed
Bpe13g00630 Bpe-Chr13:13235524 Bpe11g01273 Bpe-Chr11:9532508 7.18E-27 dispersed
Bpe13g00630 Bpe-Chr13:13235524 Bpe01g00548 Bpe-Chr1:3552891 2.17E-137 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00630 - - zju:107423247 620.928