Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00648 ATGGGTTGTGTATTTGGGAGAGAAGTATCGGCCAAGGCTGAGGACAAGAAAGAGGAGAGTGAAGAGAGAAATAAGGATGAAACTAGGGCTTCTGAGAAACCAGAGATTAACGAAGTGCAGAATGGGGGGAATCGTAATGGGGTGGAGGAAAAGAGTAGAAGGCCGAAAGCCGACCGTAGACGATCAAGGCCAAATCCAAGACTGAGCAACCCACCGAAGAACGTGCATGGCGAGCAAGTCGCTGCTGGTTGGCCATCCTGGCTCTCCTCTGTTGCAGGAGAAGCCATCAATGGCTGGACGCCTCGTCGTGCTGACACTTACGAGAAGCTCGACAAGATCGGACAAGGTACATACAGTAATGTGTACAAAGCTAGGGATACATTAACGGGGAAAATTGTGGCGATGAAGAAGGTTCGCTTTGACAATTTGGAGCCGGAGAGTGTGAAGTTCATGGCCAGAGAGATACTCATCCTTCGTCGATTAGATCATCCTAATGTTGTAAAATTGGAGGGTTTAGTCACGTCAAGGATGTTCTGCAGTTTGTATCTCGTATTTGAATATATGGAGCACGATTTGGCCGGACTTGCTGCCAGCCCAGAGATCAAATTTACCGAACCTCAGGTTAAATGTTACATGAGTCAACTATTGTCAGGACTCGAACACTGTCATGACCGATACGTCCTGCATCGTGACATAAAGGGTTCAAATCTCCTTATCGACAACGACGGAATTCTAAAGATTGCAGATTTTGGATTGGCTTCATTCTTCGATCCTAATCATAAGCAGCCCATGACTAGCAGGGTCGTTACTCTATGGTATCGCCCACCAGAATTACTTCTTGGTGCTACCGACTATGGTGTTGGTGTCGACCTTTGGAGTGCTGGATGCATATTGGCCGAGTTGTTGGCTGAGAAGCCCATCATGCCTGGTCGCACAGAGGTGGAGCAGCTGCATAAGATATTCAAGCTCTGTGGATCTCCTTCAGAAGAATACTGGAGAAAGTCAAAGTTGCCCCACGCGACAATTTTCAAGCCTCAACAATCTTACAAGCGATGCATATCCGAGACGTTTAAAGATTTTCCACCATCATCATTACCGCTGATTGAGACCCTTCTTGCAATCGACCCGGCTGAACGCCAAACTGCAACTGCTGCATTGAGTAGTGAATTCTTCAGCACTAAACCTTATGCTTGCGACCCTTCCAGCCTGCCTAAGTATCCTCCCAGTAAGGAGATGGATGCCAAGCTACGCGATGAAGAAAGTCGAAGAGGTGTTTTTCCTTCGTCCTGTTTTGTTGGATCTGACCTAAAAAACTATCTTTGTCGATGTAGGCTAAGGGTGGCTGGCAGATCCAATGCAGATGGTAGCAAGAAAACACGGCACCGCGATCGGACAGCCAGGGCAATTCCTGCTCCAGAAGCTAATGCCGAGTTTCAGGCAAATATCGATAGACGAAGGCTGATATCACATGCAAATGCAAAGAGCAAGAGCGAGAAGTTTCCTCCTCCGCACCAGGATGGAACCCTCGGCTATCCTCTAGGCACATCCCATCACATGGATCCAATATACGATCCTCCGAACGTTCCATTTAGTTCTACAAATTTCTCATACCCAAAAGCATCCATTCAGACATGGTCAGGACCGTTGATTGACCCACCCGCCGTTCCTTCCAAAAGGAAGAAACAACACTCAAAATCATCAAAGTTGTCCCAGAACGACAAACTTTCAGCCGGGATCTAA 1740 47.41 MGCVFGREVSAKAEDKKEESEERNKDETRASEKPEINEVQNGGNRNGVEEKSRRPKADRRRSRPNPRLSNPPKNVHGEQVAAGWPSWLSSVAGEAINGWTPRRADTYEKLDKIGQGTYSNVYKARDTLTGKIVAMKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMFCSLYLVFEYMEHDLAGLAASPEIKFTEPQVKCYMSQLLSGLEHCHDRYVLHRDIKGSNLLIDNDGILKIADFGLASFFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAEKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQSYKRCISETFKDFPPSSLPLIETLLAIDPAERQTATAALSSEFFSTKPYACDPSSLPKYPPSKEMDAKLRDEESRRGVFPSSCFVGSDLKNYLCRCRLRVAGRSNADGSKKTRHRDRTARAIPAPEANAEFQANIDRRRLISHANAKSKSEKFPPPHQDGTLGYPLGTSHHMDPIYDPPNVPFSSTNFSYPKASIQTWSGPLIDPPAVPSKRKKQHSKSSKLSQNDKLSAGI 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13319298 13322164 - Bpe010348.1 Bpe13g00648 113428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00648 579 MobiDBLite consensus disorder prediction 546 579 - -
Bpe13g00648 579 PANTHER OS01G0367700 PROTEIN 444 566 - -
Bpe13g00648 579 MobiDBLite consensus disorder prediction 451 468 - -
Bpe13g00648 579 PANTHER OS01G0367700 PROTEIN 52 424 - -
Bpe13g00648 579 SMART serkin_6 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00648 579 CDD STKc_CDK9_like 107 391 - -
Bpe13g00648 579 SUPERFAMILY Protein kinase-like (PK-like) 100 397 IPR011009 -
Bpe13g00648 579 MobiDBLite consensus disorder prediction 9 34 - -
Bpe13g00648 579 Gene3D Transferase(Phosphotransferase) domain 1 190 429 - -
Bpe13g00648 579 Pfam Protein kinase domain 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00648 579 Gene3D Phosphorylase Kinase; domain 1 94 189 - -
Bpe13g00648 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Bpe13g00648 579 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Bpe13g00648 579 Coils Coil 10 30 - -
Bpe13g00648 579 PANTHER CELL DIVISION PROTEIN KINASE 444 566 - -
Bpe13g00648 579 PANTHER CELL DIVISION PROTEIN KINASE 52 424 - -
Bpe13g00648 579 ProSiteProfiles Protein kinase domain profile. 107 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00648 579 MobiDBLite consensus disorder prediction 1 81 - -
Bpe13g00648 579 MobiDBLite consensus disorder prediction 479 501 - -
Bpe13g00648 579 MobiDBLite consensus disorder prediction 451 525 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00648 Bpe14g01150 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00523 Bpe-Chr13:12528385 Bpe13g00648 Bpe-Chr13:13319298 7.37E-78 dispersed
Bpe13g00648 Bpe-Chr13:13319298 Bpe15g00594 Bpe-Chr15:16852546 0 dispersed
Bpe05g00263 Bpe-Chr5:15541292 Bpe13g00648 Bpe-Chr13:13319298 0 transposed
Bpe13g00189 Bpe-Chr13:9839632 Bpe13g00648 Bpe-Chr13:13319298 0 transposed
Bpe15g00387 Bpe-Chr15:15394301 Bpe13g00648 Bpe-Chr13:13319298 6.37E-145 transposed
Bpe13g00648 Bpe-Chr13:13319298 Bpe14g01150 Bpe-Chr14:8570446 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63672 PF00069 Pkinase 5.00E-68 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00648 K08819 - csv:101217952 915.22