Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00662 ATGCAAGGAGAAACTCTTATCAACTCGGAAGGAGAACTTAGAGTAAGCTTCGGTTATCAATGCAACAGCACCGGAAGCAGCAATTACGAAGTTCTTAGCGGATGCAAGATTCAGCCTCAAATCCACAAAACGAGCAGTTTCTCTTGCTTGTCCGGAGCTGCTTTAAGCGCAAATGCTACTCTAGCAAATACAAATATATGCAATGGCCTGATAGGGGCAGAAATACTTCCTAGTTTGGACTCTCCCAATTCATTTCGACGAATTCCCTCTTCTCCGAACATTTCAAGACTCGATATTTTGTCGTCTTCTTTACAAAGCAGCTTCTCTTACTTAAGTTGCAGTCCGCCCTCTCCGCGTGATCATGACTTATACTCTTTGAAATCCATGAGTGCTCCTTCGAAAAATGAAGGTTTTCTGAATGCAACTGAAGTACAAGTGGCCGGAGGAGCTGCCGGAGAAGATAGAGTCCAAGCTGTTTGTTCTGAAGAAAATGGGTGGCTCTTTTGTGCGATTTATGACGGATTCAACGGTCGAGATGCAGCTGATTTTCTGGCTGGTACATTGTATGAAACCATTATATATTATTTTAACCTCATGGAAATTGATGGGTCACTTCAATATCCTCTTGATGATGGCAATAACTGTCATAGAGAATCGGATACAGATGTTAATAACATCTTTTGGAGTAGTTCGTTTTGTAAAAATGACACGGCTAAAGATTCATTCAGGCTTGCAGTTCTCGATAGTCTCCAACGAGCTCTCAGCCAGGCCGAGAATGATTTTCTGTACATGGTTGAACAGGAAATGGAGGATCGTCCAGATTTGGTTTCGATTGGTTCCTGTGTTTTAATAGTGCTTCTTCATGGAAAGGATTTGTACTCTTTGAATTTAGGCGATAGTCGAGTAGTCTTAGCTATGATTGGCGAATGCACTAATGTGCATGAAAATGAGAAGCTCAAAGCAGTTCAGCTTACTGAAAGTCACACAGTCGATAATGAAGCTGAACGAACTCGACTACAACACGATCATCCAGATGATCCTACAGTCGTCGTTGGCGGAAAAGTTAAAGGAAAACTGAAGGTCACTCGAGCATTTGGAGTCGGGTATTTGAAGAAGAAAAAGCTGAATGATGCACTTATGGGTATCTTAAAAGTTCGCAATCTTATAAGTCCTCCCTACATATCTACCCAGCCAGTTATGAACGTCCATAGAATTTCAAATTTCGATCGTTTTGTCATCGTAGCAAGCGACGGGTTGTTCGATTTTTTCACAAATGAAGAAGCAGTAGAGCTGGTACATTGCTATATCACGAACAATCCTTCTGGCGATCCTGCAAAATTTCTACTCGAGCAGCTAATACTGAGAGCTGCCGATTGTGCAGGCTTTACAATGGAAGAGTTAATGAATATTCCGGCTGGTAGACGGAGGAAGTACCACGACGATGTTACTGTCATGGTTATCATCCTCGGAACGAACCAGCGGACGACGAAGGCGTCGACTTTTATGTAA 1509 42.35 MQGETLINSEGELRVSFGYQCNSTGSSNYEVLSGCKIQPQIHKTSSFSCLSGAALSANATLANTNICNGLIGAEILPSLDSPNSFRRIPSSPNISRLDILSSSLQSSFSYLSCSPPSPRDHDLYSLKSMSAPSKNEGFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIIYYFNLMEIDGSLQYPLDDGNNCHRESDTDVNNIFWSSSFCKNDTAKDSFRLAVLDSLQRALSQAENDFLYMVEQEMEDRPDLVSIGSCVLIVLLHGKDLYSLNLGDSRVVLAMIGECTNVHENEKLKAVQLTESHTVDNEAERTRLQHDHPDDPTVVVGGKVKGKLKVTRAFGVGYLKKKKLNDALMGILKVRNLISPPYISTQPVMNVHRISNFDRFVIVASDGLFDFFTNEEAVELVHCYITNNPSGDPAKFLLEQLILRAADCAGFTMEELMNIPAGRRRKYHDDVTVMVIILGTNQRTTKASTFM 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13416297 13418142 - Bpe010363.1 Bpe13g00662 113442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00662 502 Pfam Protein phosphatase 2C 249 439 IPR001932 -
Bpe13g00662 502 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 501 - -
Bpe13g00662 502 PANTHER PROTEIN PHOSPHATASE 2C 2 501 IPR015655 GO:0004722|GO:0006470
Bpe13g00662 502 Gene3D - 121 498 IPR036457 -
Bpe13g00662 502 ProSiteProfiles PPM-type phosphatase domain profile. 138 489 IPR001932 -
Bpe13g00662 502 SMART PP2C_4 129 487 IPR001932 -
Bpe13g00662 502 CDD PP2Cc 151 489 IPR001932 -
Bpe13g00662 502 SUPERFAMILY PP2C-like 151 490 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00662 Bpe-Chr13:13416297 Bpe14g00836 Bpe-Chr14:6277951 0 dispersed
Bpe13g00662 Bpe-Chr13:13416297 Bpe04g00739 Bpe-Chr4:4735831 2.69E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00662 - - qsu:111988460 714.531