Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00682 ATGAATCTGACCCACGGTAAAGGGTGGATGTCAACGGCGGCTTCTAGCGCTGGTTGGAGGTCCGGCGACGTTGTCTCCGACGAGTTCCCGGTCGGTCTGCGAGTTCTAGTCGTGGACGATGATCCTACATGCCTAATGATCTTGGAGAGAATGCTTCGTGCTTGCCTCTACGAAGTTACAAAATGCCAGAGAGCAGAAGAGGCACTGTCTCTACTTCGAGGGATCAAAAATAGGTTTGATATTGTTCTAAGCGATGTTCACATGCCTGACATGGACGGATTCAAACTCCTAGAACACATTGGTCTGGAAATGGACTTGCCCGTTATAATGATGTCCGTGGATGATGGAAAACATGTTGTGATGAAGGGGATAACTCATGGTGCTTGTGATTATCTTATTAAACCGATTCGAATGGAGGCGCTGAAGAACATATGGCAGCATGTTGTTAGGAAGAGGAGGGGTGAGTGGAGGGAGTTGGAACATTCCGGTAGTTTTGAAGACGGAGATTGGCTGCGAAAACAAGCTGAGGAAGCGGATTATTCGTCCTCGGCCAATGAAGGAAGTTGGAGGAATCCAAAGAGGAGGAAGGAGGAGGAAGAGGAAGTCGAAGAAAGAGACGACTCGGCTGCATTGAAGAAGCCTCGAGTTGTTTGGTCGGTTGAACTCCACCAGCAGTTTGTGGGGGCTGTTAATCAGCTAGGAATTGACAAGGCTGTTCCCAAGAAAATTTTGGAGTTGATGAATGTTCCGGGACTTTCTAGAGAAAATGTCGCCAGCCATCTTCAGAAATATCGATTGTATCTCAGAAGGGTGAGTGGAGTATCACAGCATCAGAGTAACTCTTTCATCAGTCCACAAGAAGCAACCTTTGCTCAGATTTCTTCGATCAATGGCCTTGATCTTCAGGCTTTTGCTGTAACTGGTCAACTCCCGCAGAACATCGTCACCTTCCAAGTGCCTGGTATTAGTCGATCTGCCATAAAATCTGGGACTCCTATGCCGCTTGACGACCAGAGAAATGTCTTCAGTTTCGAAAATCCAAATCCAAAACTAAGGTTTATTGAGGGGCAACATCAAAATCTGAGTAGTAACAAGCCAGTCACTTTAATACACGGCCTTCCAGCTCATAATTTGCACAATACTGTCCAATCTAGTGCAATCCTTAGCTGCAATATCGTGACTCGGCCTCCACCGTCAGCACAAGAGCCTTTGATTGCAAATGGAGGCGGCAATGTTTTGGGAAGAAACGGGTCAGCCAATAATGGTAGAGGCACAGAAAATAATCTTCCACCGGATTCTATAATCATAAATTTTCCAATGAACCGACAGGCTGAATTGTCGGGTAATGGTTTGTCACTTCAAGGGCCCACTGGAGTTTCCGATATCCGGTTGAATGGGAAAGAATCCATCGGATTTGAGCCGAGTTTTGATATTTTCAATGACCTGCACGGTTTCAGCTTAAATTTCAATGTTTCACAACATGTTAACTCATTACAAGACTGTCTTGAAGTTTCACCTTCAGTTTTGGTTCATCAGGAAGTTCCTACTGCCCAGAAGAATTCTAGTTCATTTTCTGTTTTGAAGGCCCCGTTTTTGTCAGAAGAAGGAACCAAACAAAGTTCTGGTGAGCTCGGCTCGATTCTTGTGGGAAATTCAACAAAAGTAGGTGACGCAACTTGTAGGAATGGCCTCACTTCCAATCATTTTGGCCAGGAGGATCTTATGACTGCAATTTTCAAGCAGGTTGGCTTCCAACCTCTTCATGTAAGCATTATGCTTCAGAAGAAAGGTATACTTGCTTATGAAATCCCCTTAATTTTTTGTTTTTCAGCAACAAGACATTGGAACAGGCGAAGACGAGTCGGATTTCGATGGATATTTCTATTTATAACTCTGAACTCTCTGAGCTTCAGAAGTAAATAG 1923 44.62 MNLTHGKGWMSTAASSAGWRSGDVVSDEFPVGLRVLVVDDDPTCLMILERMLRACLYEVTKCQRAEEALSLLRGIKNRFDIVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSVDDGKHVVMKGITHGACDYLIKPIRMEALKNIWQHVVRKRRGEWRELEHSGSFEDGDWLRKQAEEADYSSSANEGSWRNPKRRKEEEEEVEERDDSAALKKPRVVWSVELHQQFVGAVNQLGIDKAVPKKILELMNVPGLSRENVASHLQKYRLYLRRVSGVSQHQSNSFISPQEATFAQISSINGLDLQAFAVTGQLPQNIVTFQVPGISRSAIKSGTPMPLDDQRNVFSFENPNPKLRFIEGQHQNLSSNKPVTLIHGLPAHNLHNTVQSSAILSCNIVTRPPPSAQEPLIANGGGNVLGRNGSANNGRGTENNLPPDSIIINFPMNRQAELSGNGLSLQGPTGVSDIRLNGKESIGFEPSFDIFNDLHGFSLNFNVSQHVNSLQDCLEVSPSVLVHQEVPTAQKNSSSFSVLKAPFLSEEGTKQSSGELGSILVGNSTKVGDATCRNGLTSNHFGQEDLMTAIFKQVGFQPLHVSIMLQKKGILAYEIPLIFCFSATRHWNRRRRVGFRWIFLFITLNSLSFRSK 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13506862 13509322 + Bpe010383.1 Bpe13g00682 113462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00682 640 Pfam Response regulator receiver domain 35 143 IPR001789 GO:0000160
Bpe13g00682 640 CDD REC_typeB_ARR-like 35 149 - -
Bpe13g00682 640 SMART REC_2 33 145 IPR001789 GO:0000160
Bpe13g00682 640 MobiDBLite consensus disorder prediction 176 207 - -
Bpe13g00682 640 MobiDBLite consensus disorder prediction 189 207 - -
Bpe13g00682 640 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 212 269 IPR017930 -
Bpe13g00682 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 392 574 IPR045279 GO:0009736
Bpe13g00682 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 375 IPR045279 GO:0009736
Bpe13g00682 640 Gene3D - 31 155 - -
Bpe13g00682 640 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 213 266 IPR006447 GO:0003677
Bpe13g00682 640 Gene3D - 210 272 - -
Bpe13g00682 640 Pfam Myb-like DNA-binding domain 215 265 IPR001005 -
Bpe13g00682 640 SUPERFAMILY CheY-like 32 157 IPR011006 -
Bpe13g00682 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 392 574 - -
Bpe13g00682 640 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 375 - -
Bpe13g00682 640 SUPERFAMILY Homeodomain-like 211 270 IPR009057 -
Bpe13g00682 640 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01103 Bpe13g00682 CCT
Bpe04g01103 Bpe13g00682 ECH
Bpe05g00823 Bpe13g00682 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00682 Bpe-Chr13:13506862 Bpe13g01498 Bpe-Chr13:20363692 1.07E-93 dispersed
Bpe15g01310 Bpe-Chr15:21341436 Bpe13g00682 Bpe-Chr13:13506862 1.53E-21 dispersed
Bpe03g00128 Bpe-Chr3:1819377 Bpe13g00682 Bpe-Chr13:13506862 1.59E-59 transposed
Bpe13g00682 Bpe-Chr13:13506862 Bpe04g01103 Bpe-Chr4:8822631 0 wgd
Bpe13g00682 Bpe-Chr13:13506862 Bpe05g00823 Bpe-Chr5:21502106 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22307 PF00072 Response_reg 2.90E-22 CL0304 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00682 - K14491 qlo:115994534 680.248