Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00700 ATGATTGCGTTTGTTGAAAATGAGACATGTTTAGCCAAGAACTATGCAGCATTTTTTGTCTTTGGAGATTCGTTGGTTGATGTTGGAAACAATAATTACATGTTAACTTTATCCAAAGCCGACTATATTCCAAATGGGATAGATTTCGGTGAGCCGACTGGTCGATTCACTAACGGGCGGACGATTGTCGATATCATTGGTCAGGAGCTGGGCTTTAAACATTTCATCCCTCCGTATCTCGCTCCAACGACCGTTGGCCCCGAGGTTCTCCGAGGGGTCAATTATGCTTCCGGAGGGGGCGGGATTTACAACCTAACTGGCTACATTTTTATTGGTCGCCTCAACATGGATGCACAGATAGATAATTTTGCAAACACTAGGCAAGAGATCATTTCAATGATTGGTCTTCCGGCAGCAATGGAGGTGTTGAATAATTCCCTGTTCTCAGTTACGATGGGCTCCAATGACTTCATCAATAACTACTTGACACCTGTTCTCTCCATCCCCCAGCAGAAGTTTATCTCTCCTCAACTCTTCGTTGATCGCATGATTTTGAAATATAGGCTCCAGCTAACCAGGCTGTTCTTGCTGGGGGCTAGGAAGATTGTTGTGACAAACGTGGGGCCAATTGGGTGTATACCTTATTTGAGGGATATAAATCCAAAAACAGGAACAAATTGTGCCATTTTTCCAAATCAATTGGCTCGTATGTTCAATTTCAAGTTGAAGAGCTTGGTTAAAGAGCTTAACCATGACCTAACTGGTTCAATTTTCATCTATGCCGATGCTTATCGGATTGTCCTAGACATCATCCAAAATCACGAGTCCTATGGATTCGAGAGTGCAGATACTGCATGCTGTTACGGTGCAGGGAAGTTCGGAGGGCTTGTGGTGTGCGGGGCCTTATCAAGGGTTTGTCGGGATAGGTCAAAGTTTGTGTTTTGGGACCCATATCATCCATCTGATGCTACCAATGTTATCATCGCCAATCGCCTTCTTGACGGAAACAACACTGACATTTGGCCGATCAATATTAAAAGACTTGCTCAGCTTTGA 1056 43.94 MIAFVENETCLAKNYAAFFVFGDSLVDVGNNNYMLTLSKADYIPNGIDFGEPTGRFTNGRTIVDIIGQELGFKHFIPPYLAPTTVGPEVLRGVNYASGGGGIYNLTGYIFIGRLNMDAQIDNFANTRQEIISMIGLPAAMEVLNNSLFSVTMGSNDFINNYLTPVLSIPQQKFISPQLFVDRMILKYRLQLTRLFLLGARKIVVTNVGPIGCIPYLRDINPKTGTNCAIFPNQLARMFNFKLKSLVKELNHDLTGSIFIYADAYRIVLDIIQNHESYGFESADTACCYGAGKFGGLVVCGALSRVCRDRSKFVFWDPYHPSDATNVIIANRLLDGNNTDIWPINIKRLAQL 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13609083 13610495 + Bpe010401.1 Bpe13g00700 113480

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00700 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 5 350 - -
Bpe13g00700 351 CDD SGNH_plant_lipase_like 17 336 IPR035669 -
Bpe13g00700 351 SUPERFAMILY SGNH hydrolase 20 334 - -
Bpe13g00700 351 Gene3D SGNH hydrolase 6 337 IPR036514 -
Bpe13g00700 351 Pfam GDSL-like Lipase/Acylhydrolase 19 331 IPR001087 GO:0016788
Bpe13g00700 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN 5 350 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00700 - - - twl:120002045 503.056
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01538 Bpe-Chr4:21740924 Bpe13g00700 Bpe-Chr13:13609083 2.51E-32 dispersed
Bpe13g00700 Bpe-Chr13:13609083 Bpe15g00351 Bpe-Chr15:15054665 3.23E-130 dispersed
Bpe14g00005 Bpe-Chr14:142197 Bpe13g00700 Bpe-Chr13:13609083 3.18E-76 dispersed
Bpe14g00306 Bpe-Chr14:3056965 Bpe13g00700 Bpe-Chr13:13609083 1.17E-73 dispersed
Bpe13g00700 Bpe-Chr13:13609083 Bpe11g00371 Bpe-Chr11:2818525 1.88E-100 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g58 . . . . . . . . . . . Cma14g01587 . Car14g01397 . . Cpe03g01324 Bhi01g01094 . . . . . Lcy11g1334 . . . . . . . . . . Cone4ag0103 . . . Cme06g00793 . Blo07g00140 . . . Bpe13g00700 . Bma06g01464 . . Cmo14g01617 . . . . . . . . . . . . . Cla05g00710 . . Cco05g0778 Clacu05g0767 Cmu05g0733 Cre05g0807 . Csa03g01522 Chy06g00758 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0014157 0 1 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 0 1 23
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00700 Bpe_Chr13 FPKM 0.0 0.0 0.0 0.0 0.398208 0.366726 0.911766 0.0 0.0 0.0