Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00701 ATGAGTGCAAATGCAACAGTGCTTGGAGTTCCTCTTCCTGCAAACCTCGTCTTCAACGACGCCAGCCCGGAATGGATGAACAAAGCCGACAACGCTTGGCAACTCACGGCAGCAACGCTTGTCGGGCTACAGAGCGTTCCGGGGCTGATAATTCTGTACGGTGCAGCGGTGAAGAAGAAATGGGCTATAAACTCGGCGTTCATGGCGCTCTACGCCTTTGCCTGCGTTCTTATCTGTTGGGTGTTATGGGGTTATAGATTGTCGTTCGGAGATAAACTTATTCCTTTTTGGGGAAAAGTTAATTTCGCTGTAGACCAGAAGTTCTTGCTTAGTCAAACATTTTCTGGGTTGTTGCCTAACGCTACAATGGTGTATTTCCAGTTCGTCTTTGCAGCGATTACTCTAATTCTGATCGCTGGTGCAGTTTTGGGTCGGATGAATTTTTTTGCTTGGATGCTGTTTGTGCCTTTGTGGCTTACTTTTTCCTACACCGTCGGAGCGTTTTCCATTTGGAGTCCAAACGGATTCCTCTTCAAACTGGGACTCATCGATTATTCCGGCGGTTATGTCATTCATCTGTCGTCCGGAGTGGCTGGTTTCACCGCAGCATATTGGGTGGGACCTCGCATGTCGACTGACCGGGAAAACTTTCCGCCGAACAACGTCCTTCTCATGCTCGCCGGAGCGGGTTTGCTCTGGATGGGTTGGACGGGGTTCAACGGCGGAGACCCTTATGTCGTCAGTGTTGATGCTTCGTTGGCTGTTTTGAACACTCATGTCTGCACTGCAGCGAGTCTCCTCACTTGGCTTGCACTTGATGTCGTTTTCTTTAGAAAACCTTCCATCATCGGCGCCGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACTCCCGCTGCTGGTGTAGTACAAGGATGGGCAGCAATACTAATGGGAATATTATCAGGCTCAATTCCATGGTTTACGATGATGGTTGTCCACAAGAAATCTAAGCTCCTCCAAAAGGTGGACGACACAATGGCTGTCTTCCACACCCACGCGGTGGCCGGAAGCCTCGGTGGGATCCTTTCCGGCCTGTTTGCTCATCCAAGACTATGCGACTTGTTTTACAGCAGTTATGGCAACTATGTCGGGCTATTTTATGGCTTCCAAATGGGAATTTTTCATACTGGGTTTCGGCAAATTGGAATTCAACTTATCGGGATCTTATTTATCGTTGCTCTCAATGTTCTGACTACAAGTTTGATCTGTTGGTTTGTACGATTGGTTGTTCCGCTGAGGATGTCCGAAGCAGACATGATCGTCGGAGATGAAGCAGCACACGGGGAAGAAGCTTATGCCATATGGGGAGATGGAGAAAAGCTCAAAAAATTTAAGCACGGTGGAATGAGTTACAGTGATGTTGAGATGGGTTAG 1416 48.23 MSANATVLGVPLPANLVFNDASPEWMNKADNAWQLTAATLVGLQSVPGLIILYGAAVKKKWAINSAFMALYAFACVLICWVLWGYRLSFGDKLIPFWGKVNFAVDQKFLLSQTFSGLLPNATMVYFQFVFAAITLILIAGAVLGRMNFFAWMLFVPLWLTFSYTVGAFSIWSPNGFLFKLGLIDYSGGYVIHLSSGVAGFTAAYWVGPRMSTDRENFPPNNVLLMLAGAGLLWMGWTGFNGGDPYVVSVDASLAVLNTHVCTAASLLTWLALDVVFFRKPSIIGAVQGMITGLVCITPAAGVVQGWAAILMGILSGSIPWFTMMVVHKKSKLLQKVDDTMAVFHTHAVAGSLGGILSGLFAHPRLCDLFYSSYGNYVGLFYGFQMGIFHTGFRQIGIQLIGILFIVALNVLTTSLICWFVRLVVPLRMSEADMIVGDEAAHGEEAYAIWGDGEKLKKFKHGGMSYSDVEMG 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13612559 13614455 + Bpe010402.1 Bpe13g00701 113481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00701 471 TIGRFAM amt: ammonium transporter 30 446 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe13g00701 471 PANTHER AMMONIUM TRANSPORTER MEP2 10 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe13g00701 471 Gene3D Ammonium transporter AmtB like domains 13 449 IPR029020 -
Bpe13g00701 471 PANTHER AMMONIUM TRANSPORTER 10 469 - -
Bpe13g00701 471 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe13g00701 471 PRINTS Rhesus blood group protein signature 254 276 IPR002229 GO:0005887
Bpe13g00701 471 PRINTS Rhesus blood group protein signature 127 143 IPR002229 GO:0005887
Bpe13g00701 471 PRINTS Rhesus blood group protein signature 223 241 IPR002229 GO:0005887
Bpe13g00701 471 Pfam Ammonium Transporter Family 32 446 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe13g00701 471 SUPERFAMILY Ammonium transporter 25 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00991 Bpe-Chr3:29438718 Bpe13g00701 Bpe-Chr13:13612559 0 dispersed
Bpe11g01296 Bpe-Chr11:9691859 Bpe13g00701 Bpe-Chr13:13612559 2.25E-23 dispersed
Bpe13g00701 Bpe-Chr13:13612559 Bpe14g01289 Bpe-Chr14:9803296 2.82E-22 dispersed
Bpe10g00171 Bpe-Chr10:4225444 Bpe13g00701 Bpe-Chr13:13612559 0 transposed
Bpe10g00387 Bpe-Chr10:11449973 Bpe13g00701 Bpe-Chr13:13612559 0 transposed
Bpe13g00701 Bpe-Chr13:13612559 Bpe14g01097 Bpe-Chr14:8182698 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00701 K03320 - fve:101303013 750.355