Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00706 ATGGAGAAGAAAGAAGAGGCTAAAACTGAGAATTCCAGTATGGCAAATTCTTCCCTCATGTTCTCCGATGAGATGTCGGCGACCTTTGCTTTATCTGGCATCTTCGACATCCCATGTGAGACCAAAAACCAATCCTTAGGCCTTTTCGATGTGTTGGGTATCGAAGATTACAGTGAATCCTTATTCGATGTCTTTTCAATGCCGTTGTTTGCGCCGGAACCGCATTCTACCGTCCCGGAGTCATCGGAGGTGCTGAATACTCCGGCGACGCCTAACTCTCCTTCAATTTCTTCATCCTCCAACGAAGCGGCGAATGATGAACAGAAGAAAGCTGGAGACGAGGATGAGCAAGATCACGAAAAGACTAATAAACACTTGAAAACTAAGAAGAAGAAGCAGAAACGGCAAAGAGAGCCGAGATTTGCGTTTATGACGAAGAGCGAAGTCGACCAGTTAGATGATGGCTACCGATGGCGGAAATACGGCCAGAAGGCTGTAAAAAACAGCCCCTATCCGAGGAGCTATTATCGTTGCACCACCGCCGGCTGCGGCGTGAAAAAACGGGTAGAACGATCCTCCGACGACTCTTCCATCGTCGTCACAACCTACGAAGGCCAACACACTCATCAATTACCACTAACGCCGCGTGGAAGCATCGGAATTTCACCGGAAATGGGCGGCGGATTCAACTCCCCATTATCTCTCCCGACAATTCAAATCAGCCACCAAAATCAACAACCCTATATGTACAACCCGCTACCTTCTCTTGGCTCCGCCGTTTTTAACCCATCCAGTTTTTCTCAGAACAAACTTGCTGGTTCTTCCTCTCCTTCTTTACTTGCAGACCACGGGCTTCTTCAAGATATTCTGCCATTTCAAACCACGAAGGAGGAATCGTAA 900 47.78 MEKKEEAKTENSSMANSSLMFSDEMSATFALSGIFDIPCETKNQSLGLFDVLGIEDYSESLFDVFSMPLFAPEPHSTVPESSEVLNTPATPNSPSISSSSNEAANDEQKKAGDEDEQDHEKTNKHLKTKKKKQKRQREPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDSSIVVTTYEGQHTHQLPLTPRGSIGISPEMGGGFNSPLSLPTIQISHQNQQPYMYNPLPSLGSAVFNPSSFSQNKLAGSSSPSLLADHGLLQDILPFQTTKEES 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13646723 13647819 + Bpe010407.1 Bpe13g00706 113486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00706 299 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 62 288 - -
Bpe13g00706 299 MobiDBLite consensus disorder prediction 106 123 - -
Bpe13g00706 299 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00706 299 SUPERFAMILY WRKY DNA-binding domain 144 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00706 299 Coils Coil 116 136 - -
Bpe13g00706 299 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00706 299 MobiDBLite consensus disorder prediction 79 105 - -
Bpe13g00706 299 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00706 299 Gene3D WRKY domain 137 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00706 299 MobiDBLite consensus disorder prediction 74 141 - -
Bpe13g00706 299 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 288 IPR044810 GO:0003700
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g01122 Bpe13g00706 CCT
Bpe13g00706 Bpe14g01092 CCT
Bpe04g01122 Bpe13g00706 ECH
Bpe13g00706 Bpe14g01092 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00858 Bpe-Chr2:6485216 Bpe13g00706 Bpe-Chr13:13646723 1.99E-23 dispersed
Bpe13g00706 Bpe-Chr13:13646723 Bpe15g00138 Bpe-Chr15:11523615 5.54E-44 dispersed
Bpe05g01003 Bpe-Chr5:22768599 Bpe13g00706 Bpe-Chr13:13646723 1.28E-31 transposed
Bpe05g01061 Bpe-Chr5:23120538 Bpe13g00706 Bpe-Chr13:13646723 8.21E-33 transposed
Bpe13g01527 Bpe-Chr13:20899597 Bpe13g00706 Bpe-Chr13:13646723 3.02E-28 transposed
Bpe13g00706 Bpe-Chr13:13646723 Bpe14g01092 Bpe-Chr14:8150578 1.36E-166 wgd
Bpe13g00706 Bpe-Chr13:13646723 Bpe03g00493 Bpe-Chr3:24696111 2.51E-81 wgd
Bpe13g00706 Bpe-Chr13:13646723 Bpe04g01122 Bpe-Chr4:9543590 1.44E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22310 PF03106 WRKY 1.50E-26 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00706 - - csin:114308380 325.479