Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00723 ATGGATAAGGACAAAACTCAAAGCCACAGTGGAGGTTTCCCGCCACCCTCAGGTCGTTATGGAGGGTTTTCGCCTGCTGGAAGCAATTATAATGTCAAATCTGAATCTTCTTCTTCATCGATGTCATTTCTGCCTATGGCTACTGCTGTGAGTTTAGACGCCAGTCATTTCGGCCTTGGACTATCGACTGATTCTAATCGTTTTAGCCATGATATTAGTCGAATGCATGATAATCCTCGAAAAAATATGGGTCATCGGCGTGCCCATTCTGAAATCCTGACTCTTCCGGATGATATTAGTTTTGATAGTGATCTAGGAGTTGTTGGTGGTGCTGATGGTCCTTCAATGTCTGATGATACTGAGGAAGATTTGTTATCTATGTACCTTGATATGGATAAATTCAATTCATCATCTGCTTCATCAGCATTTGAAGTGAGTGAGCCTTCTGCTGCTGCACTGTCTGTATCAATGACGGGAGTCTTGACTTCTTCGACTGAGAATATTGCCTTTGGTTTGAATGAGAGGCCTAGAGTTAGGCACCAGCATAGCCTGTCGATGGATGGGTCAACAACAATCAAGCCAGAGATGCTCGTATCGGGTTCTGAAGATCTATCAACAGCGGACTGTAAGAAGGCTATATCAGCTGCAAATTTAGCGGAGCTTGCCATAATTGATCCAAAAAGAGCAAAAAGAATCTGGGCAAATAGGCAGTCAGCTGCTAGATCAAAGGAAAGAAAGATGCGTTACATTGCCGAGTTGGAACGAAAAGTGCAGACTTTACAAACGGAAGGAACTTCTTTATCTGCTCAGTTGACCCTATTGCAGAGAGATGCTGATGGTCTCACGGCTGAGAATAGTGAACTGAAACTGCGCTTGCAAACAATGGAGCAACAAGTTCACCTACAAGATGCCCTGAATGACGCTCTGAAAGAAGAAATTCAGCATCTTAAAGTACTGACTGGACAAGCCATGGCTAATGGCGGATCCTTGATGAATTTTACCTCTTTAGGAGGCGGCCATGGCCAGCAAATGTACACAAACAGCCACACCATGCAGACCCTTTTAACGGCACAGCAGTTTCAGCAGCTCCAGATTCAGTCCCAGAAGCCACAGCAATTTCAGCAGCACCAACTTCATCACCTTCAACAGCAACAAATGCAGCAACTTGCTGGAGAAATGAAATTACGAACACCCGTTTATTCTCTGACTCCGAAGGATACTAATGGTTCAGATATGAGCTCATCTGCTTCAAAGGACTGCTGA 1263 44.34 MDKDKTQSHSGGFPPPSGRYGGFSPAGSNYNVKSESSSSSMSFLPMATAVSLDASHFGLGLSTDSNRFSHDISRMHDNPRKNMGHRRAHSEILTLPDDISFDSDLGVVGGADGPSMSDDTEEDLLSMYLDMDKFNSSSASSAFEVSEPSAAALSVSMTGVLTSSTENIAFGLNERPRVRHQHSLSMDGSTTIKPEMLVSGSEDLSTADCKKAISAANLAELAIIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEGTSLSAQLTLLQRDADGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMANGGSLMNFTSLGGGHGQQMYTNSHTMQTLLTAQQFQQLQIQSQKPQQFQQHQLHHLQQQQMQQLAGEMKLRTPVYSLTPKDTNGSDMSSSASKDC 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 13803757 13806891 + Bpe010420.1 Bpe13g00723 113503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00723 420 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 412 - -
Bpe13g00723 420 MobiDBLite consensus disorder prediction 401 420 - -
Bpe13g00723 420 Pfam bZIP transcription factor 227 282 IPR004827 GO:0003700|GO:0006355
Bpe13g00723 420 Coils Coil 243 312 - -
Bpe13g00723 420 MobiDBLite consensus disorder prediction 1 37 - -
Bpe13g00723 420 Gene3D - 226 301 - -
Bpe13g00723 420 SUPERFAMILY Leucine zipper domain 227 277 IPR046347 GO:0003700|GO:0006355
Bpe13g00723 420 SMART brlzneu 223 287 IPR004827 GO:0003700|GO:0006355
Bpe13g00723 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 225 288 IPR004827 GO:0003700|GO:0006355
Bpe13g00723 420 MobiDBLite consensus disorder prediction 400 420 - -
Bpe13g00723 420 CDD bZIP_plant_RF2 228 277 IPR044759 GO:0003700|GO:0006355
Bpe13g00723 420 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 412 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00723 Bpe-Chr13:13803757 Bpe15g01208 Bpe-Chr15:20772082 3.69E-53 dispersed
Bpe14g00445 Bpe-Chr14:4072844 Bpe13g00723 Bpe-Chr13:13803757 1.15E-13 dispersed
Bpe02g01113 Bpe-Chr2:14778556 Bpe13g00723 Bpe-Chr13:13803757 6.27E-56 transposed
Bpe13g00723 Bpe-Chr13:13803757 Bpe14g01060 Bpe-Chr14:7929959 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22315 PF00170 bZIP_1 3.30E-09 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00723 - - zju:107405095 540.036