Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00745 TGTTTTTCAGCAATGGGAAGGTCTTTTCTTCAAGTTGCTGCTACAGAGGAGGTTGCTCCCCCTCTCAGAGTGGTTCAGATTGAAGGATTGGTAATCTTAAAGATAATCAAACACTGCAAAGAGTTTTCACCAGCTCTCGTCACAGGGCAACTTCTTGGATTAGATGTTGGTAGCATTCTAGAAGTTACTAACTGCTTTCCTTTCCCGATTCGAGAAGAAGATGAGGAGATTGAAGCAGAGGGTGCTAATTATCAGCTCGAAATGATGAGATGTTTGAGAGATGTCAATGTTGACAATAACACCGTTGGATGGTACCAATCTACCTTCTTAGGTTCCTATCAAACATCAGAATTGATTGAAACCTTTATGAATTATCAGGAAAATATTAGACGGTGTGTCTGCATAATTTATGATCCATCCCTATCCAATCAGGGTGTCTTAGCTCTCAAGGCATTGAAGCTCTCTGATCCATTTATGGAGCTTTACAGAAGTAAAACTTTTACAGGAGAGAAATTGAGGGAGAACAACTTATCTTGGGTGGATATATTTGAAGAAATACCTATTAAAGTTCTGAATTCTGCCCTTATCAGTGCTTTTATGTCAGATCTGGAAGCAGATACCCCTGTCACTCAGGTAATAACGATATATTTCTGTAGACTGTTGGAGTTCATATGTTTCATGAACTTACTCAGTTTTCTTTTTCAGTGTGACTATGATCGGCTGCAACTTTCTACGAAACCCTTTATGGAAAGGAATATTGAATTTCTAATTGAATGTATGGATGATTTGTCATTGGAACAGCAAAAGTTCCAATTCTATAATCGAAATCTGTCGCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAAAGAAGAACTGAGAACATGGCGCGAAAAGCAGCTGGTGAAGAACCTTTACCAGAGGAGGATCCTTCAAATCCAATCTTTAAGCCTGTTGCTGAGCCATCGCGGCTGGATAGTTTCCTCATAACAAATCAAATTGGAAACTACTGTAACCAAATAAATGGGGTTGCTGGACAGAGCTTTAGCAGATTGTACTTGATGAAAGCATTGCACGACAAC 1083 39.8 CFSAMGRSFLQVAATEEVAPPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSILEVTNCFPFPIREEDEEIEAEGANYQLEMMRCLRDVNVDNNTVGWYQSTFLGSYQTSELIETFMNYQENIRRCVCIIYDPSLSNQGVLALKALKLSDPFMELYRSKTFTGEKLRENNLSWVDIFEEIPIKVLNSALISAFMSDLEADTPVTQVITIYFCRLLEFICFMNLLSFLFQCDYDRLQLSTKPFMERNIEFLIECMDDLSLEQQKFQFYNRNLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPVAEPSRLDSFLITNQIGNYCNQINGVAGQSFSRLYLMKALHDN 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14007790 14011484 + Bpe025241 Bpe13g00745 113525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00745 361 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 4 361 - -
Bpe13g00745 361 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 4 361 - -
Bpe13g00745 361 MobiDBLite consensus disorder prediction 298 317 - -
Bpe13g00745 361 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bpe13g00745 361 Gene3D Cytidine Deaminase, domain 2 4 215 - -
Bpe13g00745 361 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 361 IPR027524 GO:0003743|GO:0005737|GO:0005852
Bpe13g00745 361 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
Bpe13g00745 361 Pfam C-terminal region of eIF3h 237 359 IPR045810 -
Bpe13g00745 361 Pfam C-terminal region of eIF3h 143 211 IPR045810 -
Bpe13g00745 361 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Bpe13g00745 361 CDD MPN_eIF3h 23 310 IPR027524 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00745 Bpe-Chr13:14007790 Bpe03g01008 Bpe-Chr3:29559872 7.14E-06 dispersed
Bpe13g00745 Bpe-Chr13:14007790 Bpe02g01675 Bpe-Chr2:19387193 8.05E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00745 K03247 - twl:120014291 572.392