Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g00745 | TGTTTTTCAGCAATGGGAAGGTCTTTTCTTCAAGTTGCTGCTACAGAGGAGGTTGCTCCCCCTCTCAGAGTGGTTCAGATTGAAGGATTGGTAATCTTAAAGATAATCAAACACTGCAAAGAGTTTTCACCAGCTCTCGTCACAGGGCAACTTCTTGGATTAGATGTTGGTAGCATTCTAGAAGTTACTAACTGCTTTCCTTTCCCGATTCGAGAAGAAGATGAGGAGATTGAAGCAGAGGGTGCTAATTATCAGCTCGAAATGATGAGATGTTTGAGAGATGTCAATGTTGACAATAACACCGTTGGATGGTACCAATCTACCTTCTTAGGTTCCTATCAAACATCAGAATTGATTGAAACCTTTATGAATTATCAGGAAAATATTAGACGGTGTGTCTGCATAATTTATGATCCATCCCTATCCAATCAGGGTGTCTTAGCTCTCAAGGCATTGAAGCTCTCTGATCCATTTATGGAGCTTTACAGAAGTAAAACTTTTACAGGAGAGAAATTGAGGGAGAACAACTTATCTTGGGTGGATATATTTGAAGAAATACCTATTAAAGTTCTGAATTCTGCCCTTATCAGTGCTTTTATGTCAGATCTGGAAGCAGATACCCCTGTCACTCAGGTAATAACGATATATTTCTGTAGACTGTTGGAGTTCATATGTTTCATGAACTTACTCAGTTTTCTTTTTCAGTGTGACTATGATCGGCTGCAACTTTCTACGAAACCCTTTATGGAAAGGAATATTGAATTTCTAATTGAATGTATGGATGATTTGTCATTGGAACAGCAAAAGTTCCAATTCTATAATCGAAATCTGTCGCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAAAGAAGAACTGAGAACATGGCGCGAAAAGCAGCTGGTGAAGAACCTTTACCAGAGGAGGATCCTTCAAATCCAATCTTTAAGCCTGTTGCTGAGCCATCGCGGCTGGATAGTTTCCTCATAACAAATCAAATTGGAAACTACTGTAACCAAATAAATGGGGTTGCTGGACAGAGCTTTAGCAGATTGTACTTGATGAAAGCATTGCACGACAAC | 1083 | 39.8 | CFSAMGRSFLQVAATEEVAPPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSILEVTNCFPFPIREEDEEIEAEGANYQLEMMRCLRDVNVDNNTVGWYQSTFLGSYQTSELIETFMNYQENIRRCVCIIYDPSLSNQGVLALKALKLSDPFMELYRSKTFTGEKLRENNLSWVDIFEEIPIKVLNSALISAFMSDLEADTPVTQVITIYFCRLLEFICFMNLLSFLFQCDYDRLQLSTKPFMERNIEFLIECMDDLSLEQQKFQFYNRNLSRQQAQQQAWLQKRRTENMARKAAGEEPLPEEDPSNPIFKPVAEPSRLDSFLITNQIGNYCNQINGVAGQSFSRLYLMKALHDN | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 14007790 | 14011484 | + | Bpe025241 | Bpe13g00745 | 113525 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g00745 | 361 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | 4 | 361 | - | - | |
Bpe13g00745 | 361 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H | 4 | 361 | - | - | |
Bpe13g00745 | 361 | MobiDBLite | consensus disorder prediction | 298 | 317 | - | - | |
Bpe13g00745 | 361 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 23 | 127 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Bpe13g00745 | 361 | Gene3D | Cytidine Deaminase, domain 2 | 4 | 215 | - | - | |
Bpe13g00745 | 361 | Hamap | Eukaryotic translation initiation factor 3 subunit H [EIF3H]. | 20 | 361 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 | |
Bpe13g00745 | 361 | SMART | pad1_6 | 24 | 157 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Bpe13g00745 | 361 | Pfam | C-terminal region of eIF3h | 237 | 359 | IPR045810 | - | |
Bpe13g00745 | 361 | Pfam | C-terminal region of eIF3h | 143 | 211 | IPR045810 | - | |
Bpe13g00745 | 361 | ProSiteProfiles | MPN domain profile. | 25 | 158 | IPR037518 | - | |
Bpe13g00745 | 361 | CDD | MPN_eIF3h | 23 | 310 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe13g00745 | Bpe-Chr13:14007790 | Bpe03g01008 | Bpe-Chr3:29559872 | 7.14E-06 | dispersed | |
Bpe13g00745 | Bpe-Chr13:14007790 | Bpe02g01675 | Bpe-Chr2:19387193 | 8.05E-09 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g00745 | K03247 | - | twl:120014291 | 572.392 |