Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00749 ATGAAATCGAAGCCAGCAAGTGGAGGGAAGGTGCTGTTGAAGGTGAGGTTGGATCACCAAGTTCAATTTGGGGAGCATGTTGTAGTTCTGGGATCTACGGAAGAACTGGGCTCGTGGAAGAAGAGCGTTCCTCTGAATTGGAGTGTGAATGGATGGGCTTGCGATTTGGAGCTGGACGGGGATGATTCAGTTGAGTACAAGTTTGTAATTATTAGGAAGGATAAGAGCATGTTGTGGGAAGGAGGGCCTAATCGAGTTATCCAGCTTCCTAAGAAAGGGGTTTTCAGCTCAGTTTGCAGGTGGAATGCTACCGACGAGGCTTTGGAATTATTGCCATTGGAAGAAGAGAAAGAAGAAGAAAAGAAGGGTGTGAGAAATAATGAATCTTTTGTGGAAGTGGAGATGAGCCCTTTTGTGGGTCAATGGCAAGGGAAGGCTATCTCTTTTATGCGTTCAAATGAACATGGCAACCGAGAAAATGAGAGAAAATGGGACACCTCTAGTCTTCAGGGGTTGGCTCTACAGTTAGTAGAAGGAGATCAAAATGCAGGGAATTGGTGGAGAAAGCTTGAAGTTGTACGTGAGCTTCTAGATGAAAGTTTGCCAACTGAGGGCCGCTTGGAGGCTCTAATATATTCTGCTATCTACCTTAAGTGGACAAACACAGGCCAAATTCCTTGTTATGAAGATGGAGGTCATCACCGACCAAATAGGCATGCTGAGATTTCCAGGCTTATATTCCGCGAGTTGGAAAGAATCTATTACAAAAGAGATACTTTACCCCAGGAGGTGCTAGTTGTCCGAAAAATTCATCCATGTTTACCATCTTTCAAAACAGAGTTTACTGCTTCGGTACCTTTGACTCGAATTAGGGACATTGCTCATTGGAATGATATCCCTCATGAACTGAAGCTAGAAATCAAGCACACAATACAAAACAAGCTTCATCGTAATGCTGGTCCAGAAGATTTGATTGCTACAGAAGCAATGTTGGCAAGAATCACCAAAAATCCTGGTCAATATAGCGCCGCATTTGTTGAGCAGTTCAAGATATTCCATCATGAGCTGAAAGACTTTTTTAATGCTGGAAGCCTTGCCGAACAACTTGAATTAATTCGAGACTCTCTCGATGAATGTGGCGTTTCAGCTCTTGAAAGTTTCTTCGATTACAAGAGGAGTTTAGATGCCAAGGATGAATCAAACACAGGTGTTGAAAAAACTGGCATCGACCTATTGCTTAAAATCATGCAATCTTTGAATGCACTGAGAGAAATAATTCTGAAAGGTCTTGAAAGTGGGCTAAGAAATGATGCTCCTGATGCTGCAATTGCTATGCGTCAAAAGTGGCGTCTTTGTGAGATCGGGCTTGAGGACTACTTATTTGTTCTTCTAAGCAGGTTCCTCAATGTACTGGAAGCAGCAGGTGGGGCTCGTTTTCTTGCAGAAAATGTAGAATCGAAAAACATAAGCTCTTGGAATGATCCGCTCTGTGTCCTTATCATTGGCATGAATCAGTTGGATATATCTGGTTGGAAGACAGAAGAGTGTGAAGCTATTAAGAAGGAGGTTTTCGCTTGGAAGGAGAGGGGTCTCTCTGAACATGAAGGAAGTGAAGATGGGAAGAGAATCTGGGCATTGAGGTTCAAGGCAACTCTTGATAGAGCTAGAAGACTAACTGAAGTGTACTCTGAAGCATTTCTTCAACTATTCCCTGAGAAAGTCCAGACGCTTGGAAAAGCTTTAGGAATTCCTGAGAACAGTATAAGGACTTATGCCGAGGCTGAGATTCGAGTAAGTGTAATTTTTCAAGTCTCCAAACTTTGCACTATTCTGTTGAAAGCAGTCAGAAGCGTCCTTGGTTCTCAAGGTTGGGACGTCCTTGTTCCTGGAGTGGCTTCTGGAACGCTAATACAGGTGGACAGCATTATTCCCGGGTCTCTACCACCATCCGAAGTACCTATTATACTTCTGGTTGACAAAGCTGATGGAGATGAGGAGGTAACAGTTGCCGGAAGTAACATAGCGGGAGTAGTACTTCTACAAGAGCTTCCGCACTTGTCTCATCTTGGTGTTCGGGCTCGACAAGAGAAAGTTGTGTTTGTGACTTGTGAAGATGATGATAGAGTTACTGACGTTAAACAACTCTGTGGACAATTTGTGAGGTTGGAGGCGTCTTCATCGGCTGTTAATGTATTTTTATCTTCCGATAAGAACGATGTTACCATTGTGACTAATCTTTCAGCTGTTAATTCATCTGGGGTCGAGTGTTCTCCACCGCTTGATCCTCTCCGATCACCCGTTAAAGCTCCTTATTCCAGTCCGGGTATTCCAGGCGGAGGGGTCGTGCTGCTCTCAGATGCAGACCCGGAGACTTCTGGTGTGAAGGCTGCTGCTTGTGGTCGGTTGGCATCTTTGGCTGCAGCTTCTGGAAAAGTCTATGGCGAACAAGGTGTTCCGGCTTCATTCTGTGTCCCCAAAGGAGCAGTGGTAACATTTGGATCCATGGAAATGGCAGTAGAGCAAAGTGGATCAATCGAATCGTTTCACTCTTTGTTGGAGCAGATTGAAACGGCCAAGCTAGAAGGTGGCGAGCTCGATGAACTTTGCTGCAGTATCCAGAAACTAATATCGTCTCTTCAGCTTCCTGATCCTATCATCAATGAGTTAGGGAGAGTGTTTTCTGATAAGGCACGATTGATCGTTCGATCGAGTGCTAATGTTGAAGACCTGGCTGGAATGTCTGCTGCTGGACTTTACGAATCGATTCCTAATGTCAGTCTTGCCGATCCGATGGTGTTTGAGAATGCTGTAAGCCGAGTTTGGGCTTCGTTGTATACTCGTAGAGCGGTTTTAAGCCGCCGAGCTGCTGGCGTACCTCAAAAGGCAGCTTCAATGGCCGTTCTGGTTCAAGAAATGATCTCCCCGGATTTATCTTTTGTCCTACACACTCTCAGCCCAACCGATCAAGATAACAAATCAGTCGAGGCAGAGATCGCATCCGGGCTTGGTGAAATTCTGGCTTCTGGCACTCGCGGGACGCCATGGCGGTTAACATCTGGGAAATTCGACGGCCTAGTTCGAACCCTAGCATTTGCGAATTTCAGCGAGGAACTGATGGTTTCAAGATTAAGTCCTGCCGACGGAGACTTGATGCGTTCGACGGTCGATTACAGTAAGAAACCATTGACTGTTGATTCGATCTTCCGCCGTCAACTGGGGCAGCGTCTGTGCACCGTCGGGTTTTTCCTCGAACGGAAGTTCGGCTGCGCACAGGATGTAGAAGGATGTGTCGTTGGCGAAGATATCTTCATCGTCCAGACTCGTCCTTAA 3330 45.47 MKSKPASGGKVLLKVRLDHQVQFGEHVVVLGSTEELGSWKKSVPLNWSVNGWACDLELDGDDSVEYKFVIIRKDKSMLWEGGPNRVIQLPKKGVFSSVCRWNATDEALELLPLEEEKEEEKKGVRNNESFVEVEMSPFVGQWQGKAISFMRSNEHGNRENERKWDTSSLQGLALQLVEGDQNAGNWWRKLEVVRELLDESLPTEGRLEALIYSAIYLKWTNTGQIPCYEDGGHHRPNRHAEISRLIFRELERIYYKRDTLPQEVLVVRKIHPCLPSFKTEFTASVPLTRIRDIAHWNDIPHELKLEIKHTIQNKLHRNAGPEDLIATEAMLARITKNPGQYSAAFVEQFKIFHHELKDFFNAGSLAEQLELIRDSLDECGVSALESFFDYKRSLDAKDESNTGVEKTGIDLLLKIMQSLNALREIILKGLESGLRNDAPDAAIAMRQKWRLCEIGLEDYLFVLLSRFLNVLEAAGGARFLAENVESKNISSWNDPLCVLIIGMNQLDISGWKTEECEAIKKEVFAWKERGLSEHEGSEDGKRIWALRFKATLDRARRLTEVYSEAFLQLFPEKVQTLGKALGIPENSIRTYAEAEIRVSVIFQVSKLCTILLKAVRSVLGSQGWDVLVPGVASGTLIQVDSIIPGSLPPSEVPIILLVDKADGDEEVTVAGSNIAGVVLLQELPHLSHLGVRARQEKVVFVTCEDDDRVTDVKQLCGQFVRLEASSSAVNVFLSSDKNDVTIVTNLSAVNSSGVECSPPLDPLRSPVKAPYSSPGIPGGGVVLLSDADPETSGVKAAACGRLASLAAASGKVYGEQGVPASFCVPKGAVVTFGSMEMAVEQSGSIESFHSLLEQIETAKLEGGELDELCCSIQKLISSLQLPDPIINELGRVFSDKARLIVRSSANVEDLAGMSAAGLYESIPNVSLADPMVFENAVSRVWASLYTRRAVLSRRAAGVPQKAASMAVLVQEMISPDLSFVLHTLSPTDQDNKSVEAEIASGLGEILASGTRGTPWRLTSGKFDGLVRTLAFANFSEELMVSRLSPADGDLMRSTVDYSKKPLTVDSIFRRQLGQRLCTVGFFLERKFGCAQDVEGCVVGEDIFIVQTRP 1109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14022784 14031945 + Bpe010442.1 Bpe13g00749 113529

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00749 1109 SMART CBM_20_2 8 99 IPR002044 GO:2001070
Bpe13g00749 1109 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 788 1109 - -
Bpe13g00749 1109 Gene3D - 974 1109 - -
Bpe13g00749 1109 Gene3D Immunoglobulins 9 102 IPR013783 -
Bpe13g00749 1109 Pfam Pyruvate phosphate dikinase, AMP/ATP-binding domain 822 1109 IPR002192 GO:0005524|GO:0016301|GO:0016310
Bpe13g00749 1109 SUPERFAMILY Starch-binding domain-like 8 101 IPR013784 GO:0030246
Bpe13g00749 1109 Pfam Starch binding domain 14 93 IPR002044 GO:2001070
Bpe13g00749 1109 Gene3D - 783 973 IPR013815 GO:0005524
Bpe13g00749 1109 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 3 103 IPR002044 GO:2001070
Bpe13g00749 1109 PANTHER PHOSPHOGLUCAN, WATER DIKINASE, CHLOROPLASTIC 3 1109 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00749 K15535 PWD; phosphoglucan, water dikinase [EC:2.7.9.5] - pop:7488583 1583.54
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01793 Bpe-Chr11:14250324 Bpe13g00749 Bpe-Chr13:14022784 9.31E-39 dispersed
Bpe13g00749 Bpe-Chr13:14022784 Bpe14g01031 Bpe-Chr14:7665074 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1070 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone18ag0897 . . . . . Blo02g00408 Blo07g00074 . Bda13g00296 . Bpe13g00749 Bma02g01001 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004547 2 0 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 2 2 1 1 3 3 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00749 Bpe_Chr13 FPKM 18.932764 22.671267 34.401867 35.32756 146.025589 157.308594 153.597763 24.192722 25.619356 24.77581