Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00756 ATGGAAAAGGAGTTCTTCCTCCATGAAGGAGATGGGACTAGCACGCCTCAGGCGGCCTGGAATTACTCGCAACTTCAGAGCTCTATTTACAACCAGAATTGGGAAAATTCGATGGATCAGAGTGATCCCTTTGAGTCTGCTTTGAGCTCCATTGTATCTTCTCCTGTAGCTTCATCCGCCATTAACGGCGGTGGAGGAGAAAATTTCATGCTCAGAGAACTTATAGGAAGGCTCGGAAGCATCTGCAATTCCGGCGAGATTTCCCCGCATTCTTATGTGGGAGGGAGTACTAATACTTCTTGTTATAACACTCCATTAAATTCCCCCCCGAAGCTTAATTTATCAATGCCCGATCCGCGTGCAAGAGCTAGTTTTCAGTTTTCAGGTCATCATTTGCCTTCGCATCCAAATATTTCTCCATTTTCAGCGGACCCAGGGTTTTCAGAAAGAGCTGCGAGGTTTTCATGTTTTAATAACAATGGCAGCTTCAACGGGCGAATGGGTTTGAAAGAAACTGAAAAGACGGCTCGATCGATTTCTAGAGTTGATTCAGGCAAGTTCTCTAGAGTTTGTGGCAACCAATCGAAATCAGGAGGTCCAGAAGGCAAAGACGGGAATTCGATTCCTGAGAAGAAGTTCAATTGGTTTTCCAGATCTTCAACTCCAGAAAATACAGAATTTGGGGGTTCTAGAGAGGGATCTACACTTTCTGAGCAGAATCCAGCTGGGGAATCTAGAGTAAAAGTCAAAGGAGATTATAATTCAAGAAAAAGAAAATCAATTCCCAAAGGAGAAGCAAAAGAGTCCAAGGCTGCAGAAGAGAAAGACGACTCAAAAACAAAGAAAAACAAACAAAATGAATCTTCTGAAAATGAAAACGATGCTTCAAAGGCAAAGGCAGAACCTACTGCAGACATGAAAGATGAACAAGATGGGAATCAGAAACAGACAAAGGAAAACTCAAAGCCTCCAGAACCTCCAAAAGATTACATCCATGTCAGGGCCAGAAGGGGACAAGCAACTGATAGCCATAGTTTGGCTGAAAGAGTTAGAAGGGAGAAAATAAGCAAAAGAATGAAGTTTCTTCAGGATCTTGTTCCTGGGTGTGACAAGGTAACAGGAAAAGCAGTGATGCTTGATGAAATTATAAACTATGTCCAGTCTTTGCAGCGCCAAGTTGAGTTTCTATCTATGAAATTATCGACCATTAATCCAAGGTTGGATATAACTATGGATGGTCTTCTTCCAAAAGATATCTTTCAGTCTCTTGGGTCTTTTCCACATGCTCTTCATAATTCAGATCCATCAGTTCCACCATTTTCCTCTTCTTATCAGCCTCTGCAATTCCCGGCCATTAATGGCGGAGCCTCTTCTGGGACTGAGTTGAATCTTCCTTTGAACTCTTCAAATGATGTTCACGCTAAATATGGAGAATCTTTGCACCAAGTTTCAGAATTCTGGGAAGACGACCTTCGTAGTGTGGTTCAAATGGGTTATGATCAGAATCAGCAAAAGAGCTTTCATGGTTCAATGGCCGAAACCCAGATGAAAACCGAGCTATAA 1563 42.29 MEKEFFLHEGDGTSTPQAAWNYSQLQSSIYNQNWENSMDQSDPFESALSSIVSSPVASSAINGGGGENFMLRELIGRLGSICNSGEISPHSYVGGSTNTSCYNTPLNSPPKLNLSMPDPRARASFQFSGHHLPSHPNISPFSADPGFSERAARFSCFNNNGSFNGRMGLKETEKTARSISRVDSGKFSRVCGNQSKSGGPEGKDGNSIPEKKFNWFSRSSTPENTEFGGSREGSTLSEQNPAGESRVKVKGDYNSRKRKSIPKGEAKESKAAEEKDDSKTKKNKQNESSENENDASKAKAEPTADMKDEQDGNQKQTKENSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTINPRLDITMDGLLPKDIFQSLGSFPHALHNSDPSVPPFSSSYQPLQFPAINGGASSGTELNLPLNSSNDVHAKYGESLHQVSEFWEDDLRSVVQMGYDQNQQKSFHGSMAETQMKTEL 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14089584 14091969 + Bpe010450.1 Bpe13g00756 113536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00756 520 MobiDBLite consensus disorder prediction 212 242 - -
Bpe13g00756 520 MobiDBLite consensus disorder prediction 249 346 - -
Bpe13g00756 520 CDD bHLH_AtBPE_like 329 414 - -
Bpe13g00756 520 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 26 510 IPR024097 GO:0006355
Bpe13g00756 520 MobiDBLite consensus disorder prediction 187 201 - -
Bpe13g00756 520 Pfam Helix-loop-helix DNA-binding domain 343 390 IPR011598 GO:0046983
Bpe13g00756 520 PANTHER TRANSCRIPTION FACTOR BHLH78-LIKE ISOFORM X1 26 510 - -
Bpe13g00756 520 Coils Coil 281 301 - -
Bpe13g00756 520 SMART finulus 345 395 IPR011598 GO:0046983
Bpe13g00756 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 389 IPR011598 GO:0046983
Bpe13g00756 520 MobiDBLite consensus disorder prediction 165 346 - -
Bpe13g00756 520 Gene3D - 336 409 IPR036638 GO:0046983
Bpe13g00756 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 407 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00466 Bpe-Chr2:3028853 Bpe13g00756 Bpe-Chr13:14089584 2.13E-45 dispersed
Bpe02g02301 Bpe-Chr2:23717586 Bpe13g00756 Bpe-Chr13:14089584 3.61E-62 dispersed
Bpe04g01000 Bpe-Chr4:6981592 Bpe13g00756 Bpe-Chr13:14089584 2.56E-96 dispersed
Bpe05g00337 Bpe-Chr5:17247750 Bpe13g00756 Bpe-Chr13:14089584 2.83E-47 dispersed
Bpe05g01076 Bpe-Chr5:23265050 Bpe13g00756 Bpe-Chr13:14089584 1.49E-108 dispersed
Bpe06g00416 Bpe-Chr6:15556085 Bpe13g00756 Bpe-Chr13:14089584 8.22E-71 dispersed
Bpe10g00365 Bpe-Chr10:11243759 Bpe13g00756 Bpe-Chr13:14089584 7.57E-86 dispersed
Bpe12g00567 Bpe-Chr12:11510494 Bpe13g00756 Bpe-Chr13:14089584 1.18E-46 dispersed
Bpe13g00756 Bpe-Chr13:14089584 Bpe13g01361 Bpe-Chr13:18848862 2.87E-62 dispersed
Bpe13g00187 Bpe-Chr13:9819148 Bpe13g00756 Bpe-Chr13:14089584 1.80E-46 transposed
Bpe13g01295 Bpe-Chr13:18099896 Bpe13g00756 Bpe-Chr13:14089584 5.89E-28 transposed
Bpe13g00756 Bpe-Chr13:14089584 Bpe14g01027 Bpe-Chr14:7638472 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22316 PF00010 HLH 1.20E-05 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00756 - - qsu:112039101 549.666