Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00776 ATGGCCCTTTTCTCTCGTTTCTTCTTCAAATTGGTGCTTCTTGTCTCGGTTGCGCTTTCCCCTTGTTTTTGCTTCAACGGCTCCGAATCTCAAGCCACCAATGGTTGGTCGTCGGCCGTAGCAACGTGGTATGGCAGCGCCAATGGTGCCGGGAGTGATGTAGGGGGTGCTTGTGGATATAAAACAGCAGTATGGCAACGACCATTTTCTTCATTTATAGCAGCTGGAGGGCCATCACTGTTCAAATCAGGACAAGGATGTGGAGCTTGTTACCAGGTGACGTGCACGCAAAATTCGGCTTGCTCCGGCAGTCTGGTGACAGTGGTTATCACCGATAGTTGTCCAGGCGGTGTTTGTGCTTCTGATGCTGTCCATTTTGACTTGAGCGGCACTGCTTTTGGGGCCATGGCTAAGTCTGGACAACAAGATCAACTTCGTGCGGCAGGAAGTCTTCAAATTCAATACCAAAGGGTCCAGTGCAGTTATCCCGGCACCTCTCTCACTTTCTCTGTAGATTCAGGGTCGAATTCGAACTACTTTGCAACCCTAATCGAATATCAATGGGGAGATGGGGATCTTTCTTTAGTAGAAATCAAGCAAGGCGGAGGGTCAAACTGGTGGGCTAAAATGCAACATTCTTGGGGTGCTGTTTGGCAATTCAATAGCGGGTCGAATTTACAAGCCCCATTTTCTCTCCGACTAACCTCGTCGTCAGGCCAATCGATCGTCGCCAACAATGTCATTCCCGTCGATTGGAAACCTGGCCAAACTTATAGATTAAGCTAA 786 48.85 MALFSRFFFKLVLLVSVALSPCFCFNGSESQATNGWSSAVATWYGSANGAGSDVGGACGYKTAVWQRPFSSFIAAGGPSLFKSGQGCGACYQVTCTQNSACSGSLVTVVITDSCPGGVCASDAVHFDLSGTAFGAMAKSGQQDQLRAAGSLQIQYQRVQCSYPGTSLTFSVDSGSNSNYFATLIEYQWGDGDLSLVEIKQGGGSNWWAKMQHSWGAVWQFNSGSNLQAPFSLRLTSSSGQSIVANNVIPVDWKPGQTYRLS 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14224068 14225388 - Bpe010467.1 Bpe13g00776 113556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00776 261 SUPERFAMILY Barwin-like endoglucanases 31 164 IPR036908 -
Bpe13g00776 261 Pfam Lytic transglycolase 74 155 IPR009009 -
Bpe13g00776 261 PANTHER EXPANSIN-B2-RELATED 9 259 - -
Bpe13g00776 261 Gene3D - 24 160 IPR036908 -
Bpe13g00776 261 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 55 165 IPR007112 -
Bpe13g00776 261 SMART dpbb_1 73 155 IPR007112 -
Bpe13g00776 261 Gene3D - 161 260 IPR036749 -
Bpe13g00776 261 Pfam Expansin C-terminal domain 168 249 IPR007117 -
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 216 233 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 75 86 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 115 130 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 185 200 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 137 152 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 236 253 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Major pollen allergen Lol pI signature 169 184 IPR005795 GO:0005576|GO:0019953
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 54 72 IPR007118 GO:0005576
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 207 221 IPR007118 GO:0005576
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 35 50 IPR007118 GO:0005576
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 148 164 IPR007118 GO:0005576
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 77 95 IPR007118 GO:0005576
Bpe13g00776 261 PRINTS Expansin/Lol pI family signature 246 260 IPR007118 GO:0005576
Bpe13g00776 261 SUPERFAMILY PHL pollen allergen 166 259 IPR036749 -
Bpe13g00776 261 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 178 260 IPR007117 -
Bpe13g00776 261 PANTHER EXPANSIN-B3 9 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00071 Bpe-Chr3:1099242 Bpe13g00776 Bpe-Chr13:14224068 5.94E-81 dispersed
Bpe12g00248 Bpe-Chr12:2317539 Bpe13g00776 Bpe-Chr13:14224068 7.79E-69 dispersed
Bpe13g00776 Bpe-Chr13:14224068 Bpe14g00659 Bpe-Chr14:5299134 5.24E-69 dispersed
Bpe15g00792 Bpe-Chr15:18164351 Bpe13g00776 Bpe-Chr13:14224068 1.03E-30 dispersed
Bpe13g00775 Bpe-Chr13:14220602 Bpe13g00776 Bpe-Chr13:14224068 1.19E-144 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00776 - - qsu:112000124 349.362