Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00788 ATGGCCTTGTTGGTGGAGCCGCCTGACAGATTTAGGGCGAAGGGGAAGCACTATTACACAGTGTGGAATACATTGTTCGAGATTGATTTGAAATACATTCCGATCAAACCGGTCGGCAGAGGGTCATGCGGAGTGGTGTGCTCTTCCATCAACAGGGAAACCAATGAGAGAGTTGCGATCAAGAAGATCAGCAACGCATTCGACCATCCAACCTGTGCATTGAGAACTCTGAGGGAGCTCAAGTTGCTGCGGAACATTCAGCATCCCAATGTCATCGCTTTGAAGGAGGTGATGATGCCGAGCCATAGATCCAGTTTCAAGGATGTGTATTTGGTTTACGAGCTGATGGATACGGATCTTCATAGAATTATTAACTCTTCGATAACACTTTCACCTGATCATTGCAAGTATTTCCTCTTTCAGTTGCTCGAGGGGCTGAAATATATACATTCTGGTGGTGTTCTTCACCGCGATTTGAAGCCCGGGAACCTCCTTGTCAACGCCAACTACGATTTGAAGATTTGTGATTTTGGACTAGCGAGAACGAAGCAAGAAAATAACGAACATATGACGGAATATGTCGTCACACGTTGGTATCGTTCCCCGGAGCTGCTATTGGGTTGTGACAGCTATGGAACTTCGATTGACATGTGGTCTGTTGGGTGCATATTTGCTGAAATTCTCGGGAGGTCGCCGATCTTTCCAGGCACTAGCTGTCTAAACCAGCTGAATCTAATCATCGACCTTCTTGGTAGTCAGGAAGAAGAAGATTTAAAATTTATCAAAAGTCCAAAGGTGAAAGAGTACATAAAATCGCTTCCATTTGCAAAGAGAGTGGACTTTTCGCGTTGGTATCCTAGTGCTGATCCATTGGCCGCAGATTTATTGCAAAAGATGCTCGTTTTTAATCCAACTAAAAGAATTTCAGCGATGGAAGCACTCCAGCATCCCTACTTGAGAGAACTTAGCGACCCTATAGATTTTCCACTGCCTCACCTAGCCATCGATCTCGACGTAGATGACATGGTCGGAGAAGACACGACGCGAGAGATGATTTTGAAGGAGATGCTTTATTATCATCCCAAATCTTCTTCT 1095 44.84 MALLVEPPDRFRAKGKHYYTVWNTLFEIDLKYIPIKPVGRGSCGVVCSSINRETNERVAIKKISNAFDHPTCALRTLRELKLLRNIQHPNVIALKEVMMPSHRSSFKDVYLVYELMDTDLHRIINSSITLSPDHCKYFLFQLLEGLKYIHSGGVLHRDLKPGNLLVNANYDLKICDFGLARTKQENNEHMTEYVVTRWYRSPELLLGCDSYGTSIDMWSVGCIFAEILGRSPIFPGTSCLNQLNLIIDLLGSQEEEDLKFIKSPKVKEYIKSLPFAKRVDFSRWYPSADPLAADLLQKMLVFNPTKRISAMEALQHPYLRELSDPIDFPLPHLAIDLDVDDMVGEDTTREMILKEMLYYHPKSSS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14290186 14291389 + Bpe025246 Bpe13g00788 113568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00788 365 SUPERFAMILY Protein kinase-like (PK-like) 29 327 IPR011009 -
Bpe13g00788 365 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 362 - -
Bpe13g00788 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Bpe13g00788 365 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00788 365 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00788 365 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 362 - -
Bpe13g00788 365 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Bpe13g00788 365 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
Bpe13g00788 365 Pfam Protein kinase domain 35 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00433 Bpe-Chr13:11913713 Bpe13g00788 Bpe-Chr13:14290186 0 dispersed
Bpe13g00788 Bpe-Chr13:14290186 Bpe13g00946 Bpe-Chr13:15344080 2.61E-123 dispersed
Bpe13g00788 Bpe-Chr13:14290186 Bpe11g01839 Bpe-Chr11:14808273 1.49E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63676 PF00069 Pkinase 1.40E-69 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00788 - - jre:108993546 543.888