Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00791 ATGGAGAGGATTACGGAATCAAAAGCACTTCCTGCGAAATTGCCACTAAATAGGGTTCTAGAATCAAAGGTGCTCCCAGTGACATTGTCAAACGTGTGTTTGCCTGTTGCTATAGAAGAAGCTGGTAGGGAAGTTCACAATTCAGACTCTCATGCTCTCGTAAAATCATGGAAAGGAAAAGCCTCTTTGCCTGAAGTACTTATAACAGAAGCTTCAATGAAGGGCTGTACTGGTCCATTTGAGGAAGGTGGTCCAAGTTCATTTTCTGGGGCCAGTCATCCTCGAGAACCTGTTGATACAGATCCAATGAGAACCGTTTATGTACCAATAGGCCAAAATAAATCTGAGCCTGTTGGCCTTATAAGGAGCTTGTCTATGAAAGGTCCCTTTCTGGACGATCTTTCAATCCGGTTTCCTGCTAAAAAACCAGCCACTGTTCTTTCTCCTGCAGAAAGTTCAGTAGAAGAAAATAATGATCTTGGCGCACCATCCCCACCATTTTCAGTTCAATGCACATCACAAATTAGTGAGAATGGCCTCATCCTTCCTGATGCTGATGAAAAAGAATGTGTTTGGGATGCTTCCTTGCCTCCAAGTGGTAATGTTAGTCCGCTTAGCAGCATTGATAGCTCTGGTGTTGTCACAGCTATGAGCATTGTTAATAGCTGCGCTAGTACATATAGGAGTGATGCAATAACAAGTGATGGCATGCTTAGTGTGGAGAGAAACTGTGAGAGTACTAAAGGAAGTGTGAGAGGGGATTCACTTGAGAGTGCCAAAACAAGTATGAGCCGAGCAAGTGATAGTAGCGGTCTTAGTGATGATAGTAGCTGGAGCAAAATTACTGGAAGTGCTAATAAGCCTCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCTATTCGAGCAAGAGATGGGATTTTGGGCATGAGTCACTTTAGATTGCTTAAAAGACTTGGATGTGGGGACATTGGCAGTGTCTATCTCTCAGAATTGAGTGCAACTCGCTGCTACTTTGCAATGAAAGTAATGGACAAGGCATCCCTTGCTAGTAGGAAGAAGTTGACGAGAGCTCAAACAGAAAGGGAAATTCTACACTTACTGGATCATCCATTTCTACCTACCTTGTACACTCATTTTGAAACCGACAGATTCTCATGTTTGGTCATGGAGTATTGTCCAGGGGGCGACCTGCACACTTTAAGACAACGGCAACCAGGGAAACATTTCTCTGAGTATGCTGCAAGATTTTATGCTGCTGAGGTTCTGCTGGCACTTGAGTATCTTCACATGCTTGGAGTTGTCTATCGAGACTTGAAACCTGAAAATGTACTGGTCCGTGATGATGGCCACATTATGCTCTCTGATTTTGACCTATCACTAAGATGTGCTGTTTCCCCTACCCTCATACGATCCTCATTTGACTCTGACCCTTCCAAACGCGGTGCTGGAGGTGCATTCTGTGTTCAACCTGCCTGCATTGAGCCCACATCTGTATGCATCCAACCTGCTTGTTTTCTTCCCCGAATCTTCCCCCAAAAGAGCAAGAAAAAAAGCCAAAGGCCTCGAAATGAGCTTGGGCTACTAGGAAACACCCTTCCTGAGCTTGTTGCCGAGCCTACTGCAGCTCGTTCGATGTCATTCGTCGGAACGCATGAATACCTAGCCCCAGAAATTATCAAAGGAGAGGGTCATGGAAGTGCCGTTGATTGGTGGACATTTGGCATTTTCTTGCACGAACTACTCTATGGTAAAACTCCATTCAAAGGCTCCGGAAATCGAGCCACACTTTTCAATGTGGTCGGCCAGCAACTCAAGTTCACTGAATCTCCAGCAACTAGCTATGCAAGCCGAGATCTAATAAGAGGTCTGCTAGTGAAAGAGCCACAAGATCGTTTAGGAGTTAAAAGGGGTGCAACCGAAATAAAGCAGCACCCTTTCTTTGAAGGTGTCAATTGGGCTTTGATTAGATGCAGTACGCCTCCAGAGGTGCCTAGACCAGTGGAGACCGAACCTGCTGGCAAACACGGCGCAGTTGACTCAATCAGCGTTGGAAGCAGCAGTAAGAGAATGGTAGGGACAGATGTGAAATCTGGGGGTAAATATCTCGACTTTGAGTTCTTTTGA 2130 45.21 MERITESKALPAKLPLNRVLESKVLPVTLSNVCLPVAIEEAGREVHNSDSHALVKSWKGKASLPEVLITEASMKGCTGPFEEGGPSSFSGASHPREPVDTDPMRTVYVPIGQNKSEPVGLIRSLSMKGPFLDDLSIRFPAKKPATVLSPAESSVEENNDLGAPSPPFSVQCTSQISENGLILPDADEKECVWDASLPPSGNVSPLSSIDSSGVVTAMSIVNSCASTYRSDAITSDGMLSVERNCESTKGSVRGDSLESAKTSMSRASDSSGLSDDSSWSKITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILHLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRSSFDSDPSKRGAGGAFCVQPACIEPTSVCIQPACFLPRIFPQKSKKKSQRPRNELGLLGNTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFTESPATSYASRDLIRGLLVKEPQDRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEPAGKHGAVDSISVGSSSKRMVGTDVKSGGKYLDFEFF 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14303143 14305967 - Bpe010480.1 Bpe13g00791 113571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00791 709 Pfam Protein kinase domain 315 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00791 709 Pfam Protein kinase domain 546 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00791 709 Gene3D Phosphorylase Kinase; domain 1 312 397 - -
Bpe13g00791 709 ProSiteProfiles Protein kinase domain profile. 314 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00791 709 CDD STKc_phototropin_like 312 668 - -
Bpe13g00791 709 SUPERFAMILY Protein kinase-like (PK-like) 296 673 IPR011009 -
Bpe13g00791 709 MobiDBLite consensus disorder prediction 243 291 - -
Bpe13g00791 709 MobiDBLite consensus disorder prediction 243 286 - -
Bpe13g00791 709 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 709 - -
Bpe13g00791 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Bpe13g00791 709 SMART serkin_6 314 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00791 709 PANTHER FLIPPASE KINASE 1-RELATED 1 709 - -
Bpe13g00791 709 Gene3D Transferase(Phosphotransferase) domain 1 545 666 - -
Bpe13g00791 709 Gene3D Transferase(Phosphotransferase) domain 1 398 465 - -
Bpe13g00791 709 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00791 Bpe-Chr13:14303143 Bpe14g01168 Bpe-Chr14:8722025 0 dispersed
Bpe13g00791 Bpe-Chr13:14303143 Bpe11g01016 Bpe-Chr11:7560216 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63677 PF00069 Pkinase 1.20E-36 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00791 - - vvi:100244501 1122.07