Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00799 ATGGATTTTTTGCAGAAAGAAAAAGAAGGAATTGCACAAAACCTTTTCATTCAGCTTCAGCAAATAAAACCCATTATTTTCCAGGAAAAGTTACAGATTCAAGACCCCTCTACGAATATTTGTAATTCAAGCTTCCAAGGTCACAACAATGGCGGATGTAGAGGAGAGAGAAATGAGCCAAGAGAGAGAGAGCTTCTGTTTGAGAAAATCGTGACTCCAAGCGATGTAGGAAAGCTAAACAGGCTGGTGATTCCAAAACAATTTGCAGAAAAATACTTTCCGTTAGACTCTTCGATGAACGAGAAAGGTCTTTTTCTGAGCTTCGAAGACCGAAACGGACAACAATGGCGGTTCCGCTACTCTTACTGGAAAAGCAGCCAGAGCTTCGTCATGACAAGGGGCTGGAGTCGCTTTGTAAAAGATAAAAAACTCCACGCTGGAGATGTAGTTTCTTTCGAACGTTATGTTGCAGAAATGGGGAAAACCAGCTTCCATTTTTGGATAGATTGGAAACATCGTTCTGATATAGTTCTTCGTCAAAGAGACCTCCATTTTAATGGAAAATTACCAAAGTTCAATCTCCCCAATCTCAGGTTTGATTCGTTTCGTAATTTAAACCCACTGTCGGCGAGCTCTCAGAGATCCATGGCGGTAACGGACCCTGTCACTCCAATCCGCCATTGTAAAAGCAGTGAAGCTAAACCTAAACGACTGAGACTATTCGGAGTAAACCTGGACTGCCCAGAAGAGCCAAAACGACTCACTTATTCTCGTTTTGAGTCTTCTTCTTCTCTCTCTCCCAGTGAAACTCCATTGTTGCAGACTGAAACTCAGTTTTCCAGTAGAGGAAAAGCTTCAGCTTTCTTCCCATTTCACTGGAATCCATAG 888 42.23 MDFLQKEKEGIAQNLFIQLQQIKPIIFQEKLQIQDPSTNICNSSFQGHNNGGCRGERNEPRERELLFEKIVTPSDVGKLNRLVIPKQFAEKYFPLDSSMNEKGLFLSFEDRNGQQWRFRYSYWKSSQSFVMTRGWSRFVKDKKLHAGDVVSFERYVAEMGKTSFHFWIDWKHRSDIVLRQRDLHFNGKLPKFNLPNLRFDSFRNLNPLSASSQRSMAVTDPVTPIRHCKSSEAKPKRLRLFGVNLDCPEEPKRLTYSRFESSSSLSPSETPLLQTETQFSSRGKASAFFPFHWNP 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14351945 14352832 - Bpe010489.1 Bpe13g00799 113579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00799 295 CDD B3_DNA 66 168 IPR003340 GO:0003677
Bpe13g00799 295 Gene3D - 61 184 IPR015300 -
Bpe13g00799 295 ProSiteProfiles B3 DNA-binding domain profile. 67 172 IPR003340 GO:0003677
Bpe13g00799 295 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 50 274 IPR044800 GO:0003700
Bpe13g00799 295 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 50 274 - -
Bpe13g00799 295 SUPERFAMILY DNA-binding pseudobarrel domain 64 176 IPR015300 -
Bpe13g00799 295 SMART B3_2 67 174 IPR003340 GO:0003677
Bpe13g00799 295 Pfam B3 DNA binding domain 67 162 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe04g00972 Bpe13g00799 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00913 Bpe-Chr8:11582969 Bpe13g00799 Bpe-Chr13:14351945 9.65E-55 dispersed
Bpe11g00900 Bpe-Chr11:6679200 Bpe13g00799 Bpe-Chr13:14351945 3.39E-29 dispersed
Bpe11g01690 Bpe-Chr11:13188925 Bpe13g00799 Bpe-Chr13:14351945 8.10E-42 dispersed
Bpe13g00799 Bpe-Chr13:14351945 Bpe11g00381 Bpe-Chr11:2890171 2.56E-55 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22322 PF02362 B3 2.60E-28 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00799 - - twl:119982312 198.364