Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00803 ATGGGTTTTTCAGAGCAGGGATTATTAGCCAACACTGAACAAGACGAAGATATATTTTCATCTGGGTTGGAAAATAGAATGCCGTTTTTGCAGATGTTACAGGAAGCTCCGCCATTGTTACCCTTTAAAGAGCTCGGATTTCAAACTTTGCTGAAATTGCAGCAATTCAGGGATCCATGGGAATTCGACGAGCTGAAAATGGGAGGAAAAATTCAAACTTTCGAACTAGAAAGCTGTGTAACCCACGATCTGATGGACTTGCATTCCCCAAATAAATCAGAAAGCAATCAAATCGGATCGAACGAAGAGAAAAATTGTTTGAGAGAAGGAAGAGCCAGTTCGAAGCAGATCCAGGTGGGGAAATCTGCAGTTCTAGTGAGGGAAAGAAGAAAGAGAAAGAGAGCGAAGCCACTGAAGAACAAGGAAGACGTAGAGAGCCAAAGAATGACCCACATTGCAGTTGAGAGAAACCGGAGACGACAAATGAACGATCATCTCAACGTTCTTCGCTCTCTAATGCCGTCTTCTTACATTCAAAGAGGTGATCAAGCGTCAATCATAGGAGGAGCGATAAACTTCGTGAAAGAACTCGAACAACTCCTCCATTCTCTTGAGTCGCATCGAAGAACAAGAAACCCAGAAGGAAGCAGCTCTGCGAAAAACCAGTCTTCAGCTTCGTCCTCTTCCTCCGCCATAGCAATGGCTTCCAACGGCTTCTTCATGTCTCTCTCGCGGCACAGAATTCCTTCAGACGACCAAGACAAGGAAACCAGCTTGAAAGAACGAAGAGTCGGAGACGGAGTAACCGCAGAAAACAAATCGGAAACGGCGGATATTGAAGTGACAGTGATTCAAACCCACGTAAACTTGAAAATTCAGTGCGAGAGAAGGCCGAGACAGTTGGTGAAGGCCATTGTTGCACTGGAAGAGCTTAAGCTCACTGTTCTTCACCTCAACGTCACCACCTCACAATCTACAGTTCTTTATTCCTTCAATCTCAAGATAGAAGATGACTGTAAACTAAGGTCAGCGGACGAGATAGCAGGATCAGTGCATCAAATTTTCAGCTACATCGACGGTAGATAA 1086 44.57 MGFSEQGLLANTEQDEDIFSSGLENRMPFLQMLQEAPPLLPFKELGFQTLLKLQQFRDPWEFDELKMGGKIQTFELESCVTHDLMDLHSPNKSESNQIGSNEEKNCLREGRASSKQIQVGKSAVLVRERRKRKRAKPLKNKEDVESQRMTHIAVERNRRRQMNDHLNVLRSLMPSSYIQRGDQASIIGGAINFVKELEQLLHSLESHRRTRNPEGSSSAKNQSSASSSSSAIAMASNGFFMSLSRHRIPSDDQDKETSLKERRVGDGVTAENKSETADIEVTVIQTHVNLKIQCERRPRQLVKAIVALEELKLTVLHLNVTTSQSTVLYSFNLKIEDDCKLRSADEIAGSVHQIFSYIDGR 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14375415 14376701 - Bpe010493.1 Bpe13g00803 113583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00803 361 SMART finulus 152 203 IPR011598 GO:0046983
Bpe13g00803 361 MobiDBLite consensus disorder prediction 207 228 - -
Bpe13g00803 361 CDD bHLH_AtFAMA_like 149 211 - -
Bpe13g00803 361 MobiDBLite consensus disorder prediction 246 271 - -
Bpe13g00803 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 197 IPR011598 GO:0046983
Bpe13g00803 361 MobiDBLite consensus disorder prediction 247 269 - -
Bpe13g00803 361 PANTHER MAX DIMERIZATION, MAD 11 360 - -
Bpe13g00803 361 Gene3D - 137 212 IPR036638 GO:0046983
Bpe13g00803 361 PANTHER TRANSCRIPTION FACTOR BHLH70 11 360 - -
Bpe13g00803 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 146 212 IPR036638 GO:0046983
Bpe13g00803 361 Pfam Helix-loop-helix DNA-binding domain 147 198 IPR011598 GO:0046983
Bpe13g00803 361 MobiDBLite consensus disorder prediction 108 148 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00803 Bpe14g00842 CCT
Bpe13g00803 Bpe14g00842 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01364 Bpe-Chr11:10212970 Bpe13g00803 Bpe-Chr13:14375415 1.77E-60 dispersed
Bpe12g00372 Bpe-Chr12:8995190 Bpe13g00803 Bpe-Chr13:14375415 2.67E-34 dispersed
Bpe13g00803 Bpe-Chr13:14375415 Bpe14g00842 Bpe-Chr14:6318173 6.39E-65 dispersed
Bpe13g00803 Bpe-Chr13:14375415 Bpe14g00778 Bpe-Chr14:5923313 6.30E-133 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22324 PF00010 HLH 4.40E-10 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00803 - - zju:107423782 377.096