Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00817 ATGGAGGGCTACCCATTGATGTTTGGAAGCTCATCATCCTCAACACACCTCTATTCTGCATCTTCTCTGTCACTTCCCAACCACGCAGATTCCGAGACTTATAGTGGATACAGCACAGAAAATAAAGGAAATGGGTTGTTAAGATCGATATCGGATGATCCCACGGAAATGGAGTTTTCCGGGGGTATTCACAACAGATTTGCGCCGGAGAATGATGGTCCGGTGGAGAGAAAGGGTGAGAAGAAAACAAGAAGTCCGAGATATGCTTTCCAAACCAGAAGCCAAGTTGACATACTTGATGATGGATATAGATGGCGAAAATATGGACAGAAAGCTGTCAAGAACAACAAATTTCCCAGAAGCTACTACAGATGCACTCATCAAGGCTGCAAGGTGAAAAAACAAGTTCAGAGATTAACGAAAGACGAGGGAGTTATCGTGACCACTTACGAAGGCGTACATTCACATCCGATCGAGAAATCGACTGAAAATTTCGAGCACATTTTAAACCAAATGCAAATCTATACTTCTTAG 534 42.88 MEGYPLMFGSSSSSTHLYSASSLSLPNHADSETYSGYSTENKGNGLLRSISDDPTEMEFSGGIHNRFAPENDGPVERKGEKKTRSPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTKDEGVIVTTYEGVHSHPIEKSTENFEHILNQMQIYTS 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14475450 14476614 - Bpe010507.1 Bpe13g00817 113597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00817 177 MobiDBLite consensus disorder prediction 70 86 - -
Bpe13g00817 177 Pfam WRKY DNA -binding domain 100 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00817 177 Gene3D WRKY domain 83 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00817 177 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 3 174 - -
Bpe13g00817 177 SUPERFAMILY WRKY DNA-binding domain 91 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe13g00817 177 MobiDBLite consensus disorder prediction 1 20 - -
Bpe13g00817 177 MobiDBLite consensus disorder prediction 29 48 - -
Bpe13g00817 177 MobiDBLite consensus disorder prediction 29 86 - -
Bpe13g00817 177 ProSiteProfiles WRKY domain profile. 94 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe13g00817 177 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 174 IPR044810 GO:0003700
Bpe13g00817 177 SMART WRKY_cls 99 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01307 Bpe-Chr2:16567527 Bpe13g00817 Bpe-Chr13:14475450 6.40E-59 dispersed
Bpe05g01003 Bpe-Chr5:22768599 Bpe13g00817 Bpe-Chr13:14475450 1.09E-45 dispersed
Bpe11g01486 Bpe-Chr11:11058563 Bpe13g00817 Bpe-Chr13:14475450 5.09E-66 dispersed
Bpe13g00817 Bpe-Chr13:14475450 Bpe10g00506 Bpe-Chr10:12250802 1.98E-34 transposed
Bpe13g00817 Bpe-Chr13:14475450 Bpe04g01122 Bpe-Chr4:9543590 7.94E-34 transposed
Bpe13g00817 Bpe-Chr13:14475450 Bpe14g01092 Bpe-Chr14:8150578 4.63E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22326 PF03106 WRKY 4.10E-26 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00817 - - fve:101290922 214.157