Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00820 ATGGAGGCGAAGAGCAAGACTAATTCTCTCACCATCCTGTACAACGCCATTATCGTCACGATGGACACCGAACACCGAGTTTTCCGAGACGGTGGAATCGTGATTGAGCTTGATAAAATCGAAGCCATCGGTCGTTCTTCAGATATTCTCCTTCGTTTCTCTGCTCTCGCCGATCGCGTCATCGATCTTCATTCCCAAATCTTACTTCCTGGGTTTATCAACACGCATGTGCATACTTCCCAGCAACTCGGGAGGGGAATAGCGGACGATGTGGATTTAATGACTTGGTTGCATCAACGCATTTGGCCCTACGAATCGAACATGACCGACGAAGATTCCTACCTTTCTACTTTGCTTTGCGGTATTGAACTCATTCATTCTGGCGTGACTTGCTTTGCGGAGGCAGGCGGGCAACACGTTTCTGGAATGGCAAGGGCAGTAAAAGAACTAGGTTTGCGAGCGTGCTTAGTCCAGTCGACCATGGATTCTGGCGAAGGATTGCCACCGTCGTGGGCCTCTCGAACTACTGATGAGTGTATTCAGGATCAAAAGGAGCTCTATGAGAAGCACCATAACACAGCTGACGGCAGAATAAGGATATGGTTTGGAATCAGACAAATAATGAACGCCACTGATCGCTTATTACTCGAAACTAGGGACAATGCAAGAGAAATGAACACTGGAATTCACATGCATGTTGCAGAGATACCGTATGAAAATCAAGTTGTGATGGATGATCGAAAAGTTGACAATGGAACCGTCTCTTATTTGGCAAAAATACAGTTCCTACACAACAATTTGTTGGCTGCTCATTCAGTCTGGGTCAAAGATACTGAGATTGGTCTGCTCTCAAAAGCCGGGACAAAAGTATCTCACTGTCCTGCTTCTGCAATGCGAATGCTTGGATTTGCACCAATCAGAGAAATGCTCGAGGCCGGTCTCTGTGTTTCCTTGGGAACAGATGGAGCCCCATCAAATAACAGAATGAGTATAATTGATGAGATGTACTTAGCCTCCTTGATCAACAAAGGACGGGAAGTATATTCAAAGGGAGTAACGGATCCAACAGCTCTTCCTGCCGAAACAGTTCTAAGAATGGCCACAGTAAATGGGGCAATTTCAGTACTCTGGGATGATGAGATAGGTTCACTCGAAGTGGGGAAAAAGGCAGACATGGTTGTGGTTGATCCGTCTTCATGGTCTATGGTTCCTGTCCATGATTGCATTTCAAGCCTTGTGTACTGTATGAGGACTGAAAATGTGATATCAGTGATGTGCAATGGGCAATGGATAATGAAGGATAGGAAGATTTTGAACGTAAACGAGAAAGAAGTGATTTCATTGGCAAAGGAAGCTTCTAAGAGACTTTTAGAGAGAGCTGGAATAAGAATCCCAACAAGAATGAACTTTATTTGA 1416 44.84 MEAKSKTNSLTILYNAIIVTMDTEHRVFRDGGIVIELDKIEAIGRSSDILLRFSALADRVIDLHSQILLPGFINTHVHTSQQLGRGIADDVDLMTWLHQRIWPYESNMTDEDSYLSTLLCGIELIHSGVTCFAEAGGQHVSGMARAVKELGLRACLVQSTMDSGEGLPPSWASRTTDECIQDQKELYEKHHNTADGRIRIWFGIRQIMNATDRLLLETRDNAREMNTGIHMHVAEIPYENQVVMDDRKVDNGTVSYLAKIQFLHNNLLAAHSVWVKDTEIGLLSKAGTKVSHCPASAMRMLGFAPIREMLEAGLCVSLGTDGAPSNNRMSIIDEMYLASLINKGREVYSKGVTDPTALPAETVLRMATVNGAISVLWDDEIGSLEVGKKADMVVVDPSSWSMVPVHDCISSLVYCMRTENVISVMCNGQWIMKDRKILNVNEKEVISLAKEASKRLLERAGIRIPTRMNFI 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14493010 14496622 - Bpe010511.1 Bpe13g00820 113600

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00820 471 Gene3D Urease, subunit C, domain 1 14 447 IPR011059 GO:0016810
Bpe13g00820 471 Gene3D - 71 375 - -
Bpe13g00820 471 PANTHER AMINOHYDROLASE SSNA-RELATED 4 470 - -
Bpe13g00820 471 Pfam Amidohydrolase family 67 430 IPR006680 GO:0016787
Bpe13g00820 471 SUPERFAMILY Composite domain of metallo-dependent hydrolases 12 79 IPR011059 GO:0016810
Bpe13g00820 471 CDD ATZ_TRZ_like 11 438 - -
Bpe13g00820 471 PANTHER AMINOHYDROLASE SSNA-RELATED 4 470 - -
Bpe13g00820 471 SUPERFAMILY Composite domain of metallo-dependent hydrolases 357 462 IPR011059 GO:0016810
Bpe13g00820 471 SUPERFAMILY Metallo-dependent hydrolases 70 383 IPR032466 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00820 - - - hbr:110639095 787.334
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1308 . . . Bda11g00382 Bpe13g00820 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00292 . . . . . Bda11g00382 . . . Bma06g01337 . . . . . . . . Cpe03g01215 . . . . . . . . . . . . . . . . Chy07g01487 Cme07g01925
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009548 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00820 Bpe_Chr13 FPKM 0.0 0.0 1.432298 0.903916 0.0 0.0 0.0 0.518776 0.593768 0.586697