Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00847 ATGGCAATGCTTAAAGGAATGGGAATGTACGAGCCTATCAAAGGTTCCGACGACTGCAATACTGATTTTCGGGTTGATTCGAATGTCAAAAGTAACAATCCCGGAGTAGTTGATGAAGACGTTGAGATGGCTCTGCGGAGTTCCGAATCCATTCCTGCTATTCCTGTACAATTTCCGGCCAATGCTATTGCCAACCCCGGCGGCGGTTCTGGCTCTATCAAGCATAGGCAAACACCGCAACGGCAGCGTCTCGCTTCGCTCGACGTTTTCCGAGGACTCACCGTTGCGCTAATGATACTAGTTGACTATGCCGGTGGCATAATGCCTGCAATAAATCATTCTCCGTGGAATGGTATAACTCTTGCCGATTATGTGATGCCATTTTTCCTCTTTATCGTTGGTGTTTCGCTTGCACTAACTTATAAGAAATTGCCCGGCAGAATCTTTGCCACTCAAAAGGCAATTTTAAGAGCATTGAAGCTTTTATTATTAGGCATTTTTCTTCAAGGTAGAGGATATCTCCATGGTCTCAATGACCTAACTTATGGATTGAATATTCAACAGATGAGATTGATGGGTGTTCTACAGAGAATTGCAGTTGCATATTTGGTTGGAGCCCTGTGTGAAATTTGGCTTAGGCGAAATCAGAGTGTTAAATCAATATTGTGTCTGCTGACTAAATATCAATTTCAGTGGATTGCGATTATCATCCTCACTACCCTTTACCTTTCGCTCTTATATGGGTCATACGTTCCTGATTGGGAGTACCAGCTCCCAAGTCAAAGCTCTTCCTCTTTTGTGAAAACATTTTCTGTGAAATGTGGAGTACGAGGCGACACGGGGCCTGGTTGCAATGCTGCCGGAATGATTGATCGTAAAATACTGGGTATCCAACATCTCTATAGAAAGCCTGTATATGGACGGACAAAACAATGCAGTATTAATTCCCCCGATTATGGCCCACTATCTCCTGATGCTCCTTCTTGGTGTGAAGCTCCATTCGATCCCGAAGGGCTGCTAAGTTCGGTAATGGCTATCGTTACATGTTTGATCGGCCTGCAGTATGGGCACATCCTTATCCATTTTGAGGACCACAAGGACAGAATCCTCTACTGGATGTCCTCATCCTGTTGCTTGGTCCTCTTGGGTCTTTTGTTGGATTTCTTTTCTATGCACATAAACAAGGCTCTCTATTCGTTCAGTTACATGAGCTTCACTACCGGAGCGGCCGGGATTCTCTTTGCGGGAATCTACTTAATGGTTGACGTCTGCCAGTGGAGGCGTCCTACGATGGTGATGGAGTGGATGGGGAAGCACGCATTGCTAATATATATTCTAGCGACTTGCAATGTCGTGCCAGTCGCGGTCCAAGGATTTTACTGGAAGCACCAGCAAAACAACATTGTAATTTTATTTTTTTTCATTATTTTCGTAAATTTATGCGACTGTAGCCTGACTAAAAAGAAAGCTTCGTCCCTGTGCAGCTACGGCTAA 1494 44.44 MAMLKGMGMYEPIKGSDDCNTDFRVDSNVKSNNPGVVDEDVEMALRSSESIPAIPVQFPANAIANPGGGSGSIKHRQTPQRQRLASLDVFRGLTVALMILVDYAGGIMPAINHSPWNGITLADYVMPFFLFIVGVSLALTYKKLPGRIFATQKAILRALKLLLLGIFLQGRGYLHGLNDLTYGLNIQQMRLMGVLQRIAVAYLVGALCEIWLRRNQSVKSILCLLTKYQFQWIAIIILTTLYLSLLYGSYVPDWEYQLPSQSSSSFVKTFSVKCGVRGDTGPGCNAAGMIDRKILGIQHLYRKPVYGRTKQCSINSPDYGPLSPDAPSWCEAPFDPEGLLSSVMAIVTCLIGLQYGHILIHFEDHKDRILYWMSSSCCLVLLGLLLDFFSMHINKALYSFSYMSFTTGAAGILFAGIYLMVDVCQWRRPTMVMEWMGKHALLIYILATCNVVPVAVQGFYWKHQQNNIVILFFFIIFVNLCDCSLTKKKASSLCSYG 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14664553 14669418 - Bpe010537.1 Bpe13g00847 113627

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00847 497 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE 36 471 - -
Bpe13g00847 497 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 83 232 IPR012429 -
Bpe13g00847 497 PANTHER LD22376P 36 471 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00847 K10532 HGSNAT; heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78] - tcc:18611995 585.874
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00574 Bpe-Chr9:14521910 Bpe13g00847 Bpe-Chr13:14664553 1.71E-115 dispersed
Bpe13g00847 Bpe-Chr13:14664553 Bpe15g00808 Bpe-Chr15:18257018 4.34E-130 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1388 . . . Bda11g00358 Bpe13g00847 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00358 . . . Bma06g01311 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004910 2 2 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 4 2 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g00847 Bpe_Chr13 FPKM 8.977962 11.729598 11.258117 8.814009 15.457468 15.940965 11.745061 9.641414 8.587609 9.172319