Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00855 ATGCTTTCTGGGTTCTCTCAGGAAAGTTCGAGAATGTATTCGGCCATCCACTCTCTCCCGCTCGACGTCAAGATTCAGGGATCTTTGGAAGGAACCAACTTGCCCGGCGACGCTTGTTTGGTTCTTTCTTCTGATCCTAAACCCCGCCTCCGGTGGACGGCGGAGCTCCACGAGAGATTCGTTGACGCTGTAACTCAGCTTGGTGGCCCTGAAAAAGCAACACCTAAGACTATTATGAGGACAATGGGAGTAAAAGGCTTAACACTTTATCACTTGAAATCGCACCTCCAGAAATACCGGTTGGGGAAGCAATCAAGCAAGGAATTTACCGAGAGTATGAAAGATGGGTCTAGCATTTCACAAAATCTGGACTCTACTTCCTCGCCTCTAACATCGCCGAGAATGATACCACAAGACGTGAATGATGGTTATCAGGTAACCGAGGCTTTGCGTGTTCAAATGGAAGTTCAGAGAAGACTACACGAGAAGCTGGAGGTGCAGCGCCGGCTTCAAATTCGAATTGAAGCACAAGGAAAATACCTGCAAACGATCATCGAGAAAGCATGTCAAGCTGTGAGTGATCAAGCTGCTGCCTCAGTCGGGCTCGAATCTGCAAGGGAAGAGCTGTCTGAGTTGGCAATTCAGGTTTCGACCGATTATCGAGGAATGGGCTCGAATGACACCCTCAAAATGCCATCTTTGTCAGAACTCTCCGCAGCTCTCGAAAATCGAAATGCTCCTCCCAATATTCCTTCTCGCATGGGCGATTGCTCAGTGGAGAGCTGCTTGACATCAGCTGGAAGCCCCGTTTCTTCTATGGGAATCGGCTCAACCACTGCAGTAATGGAGAAGAGACCGAAATCATTGTTCGGAAACGGGGACTCATTGCCTTTGGACCCGAACATTCGACACGAAATCGAATGGATGATGACAAACATTGGACGATAA 948 48.52 MLSGFSQESSRMYSAIHSLPLDVKIQGSLEGTNLPGDACLVLSSDPKPRLRWTAELHERFVDAVTQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSSKEFTESMKDGSSISQNLDSTSSPLTSPRMIPQDVNDGYQVTEALRVQMEVQRRLHEKLEVQRRLQIRIEAQGKYLQTIIEKACQAVSDQAAASVGLESAREELSELAIQVSTDYRGMGSNDTLKMPSLSELSAALENRNAPPNIPSRMGDCSVESCLTSAGSPVSSMGIGSTTAVMEKRPKSLFGNGDSLPLDPNIRHEIEWMMTNIGR 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14754415 14757194 + Bpe010544.1 Bpe13g00855 113635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00855 315 MobiDBLite consensus disorder prediction 107 137 - -
Bpe13g00855 315 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Bpe13g00855 315 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 311 IPR044848 GO:0003700
Bpe13g00855 315 Pfam MYB-CC type transfactor, LHEQLE motif 145 190 IPR025756 -
Bpe13g00855 315 MobiDBLite consensus disorder prediction 111 135 - -
Bpe13g00855 315 Gene3D - 46 104 - -
Bpe13g00855 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Bpe13g00855 315 PANTHER PROTEIN PHR1-LIKE 2 12 311 - -
Bpe13g00855 315 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Bpe13g00855 315 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01353 Bpe-Chr4:20055325 Bpe13g00855 Bpe-Chr13:14754415 9.01E-52 dispersed
Bpe12g00030 Bpe-Chr12:272030 Bpe13g00855 Bpe-Chr13:14754415 3.93E-66 dispersed
Bpe13g00382 Bpe-Chr13:11596502 Bpe13g00855 Bpe-Chr13:14754415 3.68E-17 dispersed
Bpe13g00855 Bpe-Chr13:14754415 Bpe15g00926 Bpe-Chr15:19025279 5.23E-71 dispersed
Bpe03g01302 Bpe-Chr3:31514327 Bpe13g00855 Bpe-Chr13:14754415 1.14E-59 transposed
Bpe04g01337 Bpe-Chr4:19944011 Bpe13g00855 Bpe-Chr13:14754415 1.01E-67 transposed
Bpe01g00053 Bpe-Chr1:345035 Bpe13g00855 Bpe-Chr13:14754415 4.46E-69 transposed
Bpe11g01644 Bpe-Chr11:12578540 Bpe13g00855 Bpe-Chr13:14754415 9.43E-53 transposed
Bpe13g00855 Bpe-Chr13:14754415 Bpe14g00844 Bpe-Chr14:6325672 1.60E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22331 PF00249 Myb_DNA-binding 2.70E-07 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00855 - - rcu:8280672 442.195