Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00859 ATGATTGAAAGGTCGACAAACCTTGATTGGTACAAGGGCCCCACTCTCCTGGAAGCTCTCGACATGATCCAGGAGCCCAAGAGGCCTTCAGACAAGCCCCTTCGACTTCCACTTCAGGACGTCTACGAGATCGGTGGCATTGGCACTGTCCCAGTCAGCCGAGTCGAAACGGGTGTTCTAAAACCTGGAATGGTGGTCACCTTCGGACCCACCGGACTGACCACTGAAGTCAAGTCTGTGGAAATGCACCATGAGGCTCTTCAGGAAGCTCTCCCTGGCGACAATGTCGGATTCAACGTGAAGAATGTGGCCGTAAAAGATCTTAAACGAGGCTTTGTCGCATCCAACTCCAAGGCCGATCCTACCAAGGAGGCTGCCAACTTCACATCACAGGTTATTATCATGAACCACCCTGGCCAGATCGGAAATGGCTATGCCCCGGTCCTCGATTGCCACACCTCCCACATCGCTGTGAAGTTTGCAGAGATTCTTACGAAAATCGACAGACGGTCTGGTAAGGAGCTGGAGAAGGAGCCAAAGTTTTTGAAGAATGGTGATGCTGGAATGGTGAAGACTATTCCCACCAAGTCCATGGTGGTCGAGACTTTCTCCGAATACCCACCACTCGGTCGTTTCGCTGTCAGGGACATGCGGCAGACTGTGGCCGTCGGTGTCATAAAGAGCGTAGAGAAGAAGGATGCAAGCGGAGCCAAAGTCACCAAATCTGCTGCCAAGAAAGGAGGAAAGTAA 750 52.13 MIERSTNLDWYKGPTLLEALDMIQEPKRPSDKPLRLPLQDVYEIGGIGTVPVSRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKADPTKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKTIPTKSMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDASGAKVTKSAAKKGGK 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 14767824 14768573 - Bpe010547.1 Bpe13g00859 113639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00859 249 Gene3D Translation factors 123 230 - -
Bpe13g00859 249 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 126 229 IPR009001 -
Bpe13g00859 249 CDD EF1_alpha_II 30 120 - -
Bpe13g00859 249 PANTHER ELONGATION FACTOR 1-ALPHA 1 247 - -
Bpe13g00859 249 Pfam Elongation factor Tu C-terminal domain 122 229 IPR004160 -
Bpe13g00859 249 CDD EF1_alpha_III 123 226 - -
Bpe13g00859 249 PANTHER TRANSLATION FACTOR 1 247 - -
Bpe13g00859 249 SUPERFAMILY Translation proteins 31 160 IPR009000 -
Bpe13g00859 249 Pfam Elongation factor Tu domain 2 48 113 IPR004161 GO:0005525
Bpe13g00859 249 Gene3D Translation factors 3 118 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00859 Bpe-Chr13:14767824 Bpe15g01323 Bpe-Chr15:21413315 2.87E-56 dispersed
Bpe13g00859 Bpe-Chr13:14767824 Bpe08g00145 Bpe-Chr8:770039 8.60E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00859 K03231 - peu:105130829 476.092