Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00896 ATGGCTGGTTTAGATTTAAGCTCAGCTTCTCGCTTTATCTATCAACTCCAGCAGCGTCCGGACCTTCATCTCCGACGACCTGCCACAGGCGAAGATGTCTCCAATCCCAACCACTTCGCTGGAGCGGACGACGAGGAAGAAAATACCCACCAGGGCGTTGACCTAATTACCTCCAACGCAGGACCCGGCGACATAGTAACTCGCCGGCCAAGAGGCCGACCTCCGGGGTCCAAAAACAAGACGAAACCTCCGGTGATCATAACCAGAGAGAGCGCAAACACTTTGCGAGCTCATATACTAGAGGTCAGCTCCGGCTCTGACATGTTTGAATCGGTGGCGACTTATGCTCGGAAGCGTCAGAGAGGGATCTGTGTATTAAGCGGAAGTGGAACAGTGACTAACGTCAGCTTACGTCAACCCTCGTCTCCTGGAGCTGTCGTCACGCTACAAGGCCAGTTTGAGATCCTGTCTTTAACCGGTTCGTTTTTGCCTCCACCGGCTCCTCCTGGCGCCACCAGTTTGACGATATTCTTGGCCGGCGGACAAGGTCAGGTAGTAGGAGGTAATGTGGTCGGTGCTCTGATTGCCGCAGGCCCAGTCATCGTTATCGCTTCGTCGTTCACAAACGTGGCTTACGAGAGATTACCATTGGACGAAGAGGAGCCCATCCAGCAGCCTTCAGCCGAAGACTCCGGAACTGGTTCCGGCAGAAATAACCCTTTTCCGAACCCTTCTTCTGGTTTTCCGTTCTTTAATCTTCCGAACCAGAATCAGGTTCCGTCGGTTGACGGGTGGGGCGGAAATTCAGCAGGAAGACCCTCTTACTGA 828 53.62 MAGLDLSSASRFIYQLQQRPDLHLRRPATGEDVSNPNHFAGADDEEENTHQGVDLITSNAGPGDIVTRRPRGRPPGSKNKTKPPVIITRESANTLRAHILEVSSGSDMFESVATYARKRQRGICVLSGSGTVTNVSLRQPSSPGAVVTLQGQFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFTNVAYERLPLDEEEPIQQPSAEDSGTGSGRNNPFPNPSSGFPFFNLPNQNQVPSVDGWGGNSAGRPSY 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15019899 15020726 - Bpe010581.1 Bpe13g00896 113676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00896 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 221 - -
Bpe13g00896 275 ProSiteProfiles PPC domain profile profile. 92 229 IPR005175 -
Bpe13g00896 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 275 IPR014476 GO:0003680
Bpe13g00896 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 275 - -
Bpe13g00896 275 MobiDBLite consensus disorder prediction 218 275 - -
Bpe13g00896 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 209 IPR005175 -
Bpe13g00896 275 Gene3D - 95 225 - -
Bpe13g00896 275 MobiDBLite consensus disorder prediction 226 264 - -
Bpe13g00896 275 MobiDBLite consensus disorder prediction 23 83 - -
Bpe13g00896 275 CDD DUF296 96 179 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00699 Bpe-Chr11:5379086 Bpe13g00896 Bpe-Chr13:15019899 1.01E-72 dispersed
Bpe13g00896 Bpe-Chr13:15019899 Bpe14g00904 Bpe-Chr14:6741793 7.11E-69 dispersed
Bpe08g00845 Bpe-Chr8:10747501 Bpe13g00896 Bpe-Chr13:15019899 4.33E-108 transposed
Bpe13g00896 Bpe-Chr13:15019899 Bpe05g00608 Bpe-Chr5:20055925 2.11E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00896 - - nnu:104610369 367.081