Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00911 ATGAATTCTAGGTTTCTGATCGTTTTCTTTGAACTTTGCCAGTCTGTTACTCTGCATACTAATCTTGGCGACATCAAGTGCGAAATTTTTTGCGATGAAAATTTTTTGGCACTATGCGCGAGTGGTTATTATGAAGGAACCATTTTTCATCGAAATATTAAAGGTTTTATGATACAAGGTGGAGACCCAACAGGTACTGGCAAAGGGGGGACGAGTATTTGGGGCAAAAAGTTTAATGACGAGATAAGAGAGTCACTCAAGCATAATGCACGAGGAATGTTATCTATGGCCAACAGCGGACCCAACACCAATGGCAGCCAGTTTTTTATAACTTACGCAAAGCAACCACATCTGAATGGACTTTATACTATATTTGGCAGGGTGATTCATGGGTTTGAAGTCCTTGATATCATGGAAAAGACTCCAACTGGACCAGGGGATCGACCTCTTGCTGAGATCAGGCTCAATCGCGTAACCATCCATGCTAATCCACTTGCTGGCTAG 504 42.26 MNSRFLIVFFELCQSVTLHTNLGDIKCEIFCDENFLALCASGYYEGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGRVIHGFEVLDIMEKTPTGPGDRPLAEIRLNRVTIHANPLAG 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15103459 15105937 + Bpe010595.1 Bpe13g00911 113691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00911 167 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 61 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 119 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 15 166 IPR044666 -
Bpe13g00911 167 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 159 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 33 160 IPR002130 GO:0000413|GO:0003755
Bpe13g00911 167 PIRSF Peptidylpro_ismrse 4 164 IPR024936 GO:0003755
Bpe13g00911 167 CDD Cyclophilin_PPIL3_like 15 160 - -
Bpe13g00911 167 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 44 61 IPR020892 GO:0003755|GO:0006457
Bpe13g00911 167 Gene3D - 11 167 IPR029000 -
Bpe13g00911 167 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3 15 166 - -
Bpe13g00911 167 SUPERFAMILY Cyclophilin-like 15 164 IPR029000 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00007 Bpe-Chr10:164218 Bpe13g00911 Bpe-Chr13:15103459 1.78E-55 dispersed
Bpe11g00851 Bpe-Chr11:6306371 Bpe13g00911 Bpe-Chr13:15103459 9.78E-45 dispersed
Bpe13g00911 Bpe-Chr13:15103459 Bpe12g00062 Bpe-Chr12:455099 7.04E-37 dispersed
Bpe13g00911 Bpe-Chr13:15103459 Bpe15g00827 Bpe-Chr15:18346034 7.13E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00911 K12734 - ath:AT1G01940 301.597