Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00917 GTTTGTTTCCATCAGGGAACCTCTGCAGATTCATCAACTTCGTCGAAGATCGTCCTCTACTCTTTCTGGCAGAGCTCTTGCTCTTGGCGAGTACGTTTCGCTCTGAATCTCAAAGGGCTTTCGTACGATTACAGATCGGTAAACCTAGCAAAAGGTGAAAATTTTAGTCCAGAATTCGAGCGTTTAAACCCTCTTAAGTATGTCCCAGTATTAGTGGATGGGGATGTGGTTCTGTCGGACTCCTTTGCAATACTTCTGTATTTGGAAGAGAAGTATCATCAAAAACCATTATTGCCTGCTGATCCTCAGCTTAGAGCTCTTAATCTTCAGGCTGCGAGTGTGGTTACTTCTAGCATACAACCTCTAATTATGTTGGCCTTGCTGAAATCTATTGAGGAAAAAGTTGGTCCTGAAAAACAACAATTGTGGGCTCAGTCCACCATAGAAAAAGGTTTTTCTGCTCTAGAGAAGTTGCTGAAGAATTTTGCTGGAACTTATTCCACTGGGGAAGAAGTGTATATGGCTGATGTGTTCTTGGCCCCCCAGATTGCTATTGCAATTACCAAGTTCAAAATTGACATGTCCAAGTTCCCTCTTTTAGGAAGGCTGTTTGAATCGTACAAGACCTTACCAGAATTCCAAGCCTCCCAGCCCGATCGACAACCTGATGCATTCCAT 678 43.22 VCFHQGTSADSSTSSKIVLYSFWQSSCSWRVRFALNLKGLSYDYRSVNLAKGENFSPEFERLNPLKYVPVLVDGDVVLSDSFAILLYLEEKYHQKPLLPADPQLRALNLQAASVVTSSIQPLIMLALLKSIEEKVGPEKQQLWAQSTIEKGFSALEKLLKNFAGTYSTGEEVYMADVFLAPQIAIAITKFKIDMSKFPLLGRLFESYKTLPEFQASQPDRQPDAFH 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15139484 15145528 + Bpe025257 Bpe13g00917 113697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00917 226 Pfam Glutathione S-transferase, N-terminal domain 19 96 IPR004045 -
Bpe13g00917 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Bpe13g00917 226 SFLD Glutathione Transferase (cytosolic) 18 204 IPR040079 -
Bpe13g00917 226 Gene3D Glutaredoxin 19 95 - -
Bpe13g00917 226 TIGRFAM maiA: maleylacetoacetate isomerase 19 224 IPR005955 GO:0003824|GO:0005737|GO:0009072
Bpe13g00917 226 CDD GST_N_Zeta 17 89 IPR034333 -
Bpe13g00917 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 225 IPR010987 -
Bpe13g00917 226 SUPERFAMILY Thioredoxin-like 14 100 IPR036249 -
Bpe13g00917 226 Pfam Glutathione S-transferase, C-terminal domain 138 214 IPR004046 -
Bpe13g00917 226 SFLD Main (cytGST) 18 204 - -
Bpe13g00917 226 PANTHER MALEYLACETOACETATE ISOMERASE 8 225 - -
Bpe13g00917 226 SUPERFAMILY GST C-terminal domain-like 96 224 IPR036282 -
Bpe13g00917 226 CDD GST_C_Zeta 102 221 IPR034330 -
Bpe13g00917 226 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 8 225 - -
Bpe13g00917 226 Gene3D - 98 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01706 Bpe-Chr11:13332090 Bpe13g00917 Bpe-Chr13:15139484 1.16E-94 dispersed
Bpe12g00457 Bpe-Chr12:10322389 Bpe13g00917 Bpe-Chr13:15139484 4.01E-11 dispersed
Bpe13g00917 Bpe-Chr13:15139484 Bpe09g00277 Bpe-Chr9:2088881 7.32E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00917 K01800 - pvy:116128110 324.324