Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00937 ATGGATTTTGCATGTACTTTCTCGCGGCCGAAGGTGGTGTGTGGCAGTGTTGGAACGAGTTATAATACACCAGACCGTGTTAATTCATACAATGTGTTTAGAAGTAGAGTCATCGATTTTAAGTTTCTTGGTAGTCCAAAAATTGTTACTAAAGAGAGATTGAGAAAGAAGATGAAACTCACAGCTAATCATGGTTCAGCAAATACAAGTGTGGGTTTTAACAGATTGTATGATATCCAGTCCAAAAACAAAATTTCGAGGATATTGTTATTCAATAATAGTGACATTGCATTGAAGATGTCAAGGGTTGCTGTCTCACAGTGTCAAGGAAATGATTCTTTAGCATTTATTGGTGGAAATGGTAGAAATGCGGAGTTCATGGATGGCTGTGATGATGCCTTGGAATCAGGGTCCATTGATGATGATCAACCCTTGGGTTTAAGGGAAGTTGATGAAAAAGATGAAGAGAGAGAAAAAGAAGCCCCCAGTGTGGATGAATTGAGAGAATCTCTTCAAACTGCCATAATGGAACTGGAAGTTGCTAGGATCAATAGCACCATGTTTGAGGAAAAGGCCCAGAAGATATCAGAAACAGCGATAGCCTTACAAGACGAAGCTGCCAACGCTTGGAATGATATTAATTCTACTCTTGACGTTATTCAACAAATTGTGAATGAAGAATGTATCGCCAAAGAGTCAGTTCAGAAAGCAACAATGTCTCTTTCATTAGCTGAGGCAAGGCTTCAGGTTTCAATTGAATCTGTAGAGATTGCAGAAGGTGGAGATGATTCTCCAGAAAGGTCAGGAGATAGTGACGGGGACTACGATGTTAAGGAGACGGAAAAAGTTGTGTTAATTGCTCAGGAGGACATAAAGGAGTGCCAACTGGGTTTGGCAAATTGTGAGGCAGAACTGAAGCGCATACGGAGTAAAAAAGAGGAACTTCAGAAAGAAGTGGACAGGCTTAATGAGGTTGCAGAAAAAATGCAACTGAATGCTTTGAAGGCTGAGGAGGATGTGGCTAACATAATGCATTTAGCTGAGCAAGCTGTTGCTCTTGAACTTGAGGCTGCACAAAGGGTCAATGATGCTGAGATTGCTTTACAGAAAGCAGAAAAATCTCTTGCTAATACTTCTATCGACCCTTCTGAAACTATGCAAGGGAAGGAGTTCAGTGATGAGGTTGTTGTTGAGGAGAGACTGCTTCAAGCAATGCCTGTTGATTTCACTGTTGACAATGACAGAAATGTTTCTACAGAGGGTAATTCTTTTGATATCAAGCCTTTACTGGATAGCTTTTCTGATTCTGAAGACCTCAACAAGTCTAATGACTTTAGTGACCATGAGAATGGAAGGTTGAGTTTTGACTCCCCCAAGGAGGGTGACATCGAACTGGATAAGTCAAAGATTATGGGTCAAACAAAAAAACAGGAAATGCAGAAGGACTTGGTCAGGGAAACTTCACCCTCAAATACTCCCAAGGCATTATTAAACAAATCTTCTCGTTTTTTTTCTGCATCATTCTTTTCTTTTACTGTGGACGGGACTGAGTTCACACCGGCATCGGTTTTCCGGAGTCTCATGGAGTTTTCAAGGAAGCATTTGCCCAAAGTAGTTGTTGGATTACTACTATTTGGAGGGGCAACCTTTGTTGCTATTCATGCTGAGAGGGGTCCTCAGCTATTTCAACAAGAAGATGTTGTCACCTCTAGCATTGAAGAAGTTTCGTCAAAACCTCTTGTTCATCAACTTAGAAATCTTCCAAAGAGAGTTAAAAAATTAATAGCAATGCTTCCGCATCAAGAGGTGAATGAGGAAGAAGCTTCCCTTTTTGACATGTTGTGGCTACTGCTTGCCAGTGTAATATTTGTCCCTCTATTTCAGAGGATTCCTGGAGGCAGCCCTGTTCTTGGTTACTTAGCTGCTGGAATCTTGATCGGGCCTTATGGTCTTTCCATAATTCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTATTTCTACTGTTCAACATTGGCCTTGAGCTATCAGTGGAAAGGTTGAGTTCTATGAAGAAATATGTTTTTGGGTTGGGCTCTGCTCAGGTTTTGGTTACGGCTGTGGTGGTTGGCTTGGTTGCTCATTTCCTATGTGGGCAGCTTGGTCCTGCTGCAATTGTCATTGGAAATGGTCTAGCTTTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAACGAGGTGAGAGCACGTCACGGCATGGACGCGCTACATTTTCTGTCCTATTGTTCCAGGATTTGGCCGTTGTTGTATTGCTGATACTCATACCTCTTATTTCACCAAATTCATCAAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCTCTTGGAATGGCTGCTGTTAAGGCAGTAGTTGCCATTTCTGCCATTATAGCTGGTGGGCGCTTGCTACTTCGACCTATTTATAAGCAAATTGCAGAAAATCGAAATGCAGAAATATTCTCTGCAAATACACTCCTTGTTATTTTAGGAACAAGTTTACTAACAGCAAGGGCTGGACTATCCATGGCATTGGGAGCATTTCTAGCTGGTTTACTTCTTGCAGAAACAGAATTTTCTTTGCAAGTTGAATCTGATATTGCTCCATATCGTGGTCTTTTGTTGGGTCTTTTCTTCATGACGGTTGGAATGTCTATTGATCCAAAGCTTCTTATTTCAAATTTTCCAGTTGTTACTGGGTCATTGGGGCTCCTAATCGGTGGCAAGACCTTATTAGTTGCGTTAGTTGGTAAGCTTTTTGGTATCTCAATCATATCTGCAATACGAGTTGGTCTACTTCTTGCTCCAGGGGGAGAGTTTGCTTTTGTTGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCTCAGTTGTCCTCGTTGCTATTTCTTGTGGTTGGGATTTCTATGGCCCTCACCCCATGGCTAGCTGCTGGAGGCCAATTGATTGCTTCTCGATTTGAACTGCATGATGTTCGGAGTTTGTTACCTGATGAGAGAGAGACAGATGATTTGCAAGATCATATTATCCTTTGTGGATTTGGACGAGTTGGCCAGATAATTGCACAGCTTCTTTCAGAGCGGCTTATTCCTTTTGTTGCTCTCGATGTGAGGAGTGACAGAGTGGCAGTTGGACGTGCACTCGACCTTCCTGTGTATTTTGGAGATGCTGGTAGCAGAGAGGTTCTTCATAAAATTGGTGCTGAAAGAGCATGCGCGGCTGCAATAACTCTGGATTCACCTGGTGCAAATTATAGAACTGTTTGGGCGCTTAGCAAGTATTTTCCAAATGTCAAGACTTTTGTTCGTGCTCATGATGTTGATCATGGGCTTAATTTAGAAAAGGCTGGTGCAACAGCGGTTGTCCCAGAAACTTTGGAACCAAGTCTGCAGCTCGCGGCTGCCGTTCTTGCCCAGGCTAAACTACCCACGTCAGAGATTGCAGCTACAATCAACGAATTCAGGTCTCGTCATTTGTCGGAGCTCAGTGAGTTATGTGAAGCCAGTGGAAGCTCTCTTGGATATGGGTTTTCAAGAATGATGAGTAAATCAAAACCTCAATCCCCAGATTCTTCAGAAGAGAACCAAATTATTGAAGGAACTTTAGCTATATAA 3645 42.19 MDFACTFSRPKVVCGSVGTSYNTPDRVNSYNVFRSRVIDFKFLGSPKIVTKERLRKKMKLTANHGSANTSVGFNRLYDIQSKNKISRILLFNNSDIALKMSRVAVSQCQGNDSLAFIGGNGRNAEFMDGCDDALESGSIDDDQPLGLREVDEKDEEREKEAPSVDELRESLQTAIMELEVARINSTMFEEKAQKISETAIALQDEAANAWNDINSTLDVIQQIVNEECIAKESVQKATMSLSLAEARLQVSIESVEIAEGGDDSPERSGDSDGDYDVKETEKVVLIAQEDIKECQLGLANCEAELKRIRSKKEELQKEVDRLNEVAEKMQLNALKAEEDVANIMHLAEQAVALELEAAQRVNDAEIALQKAEKSLANTSIDPSETMQGKEFSDEVVVEERLLQAMPVDFTVDNDRNVSTEGNSFDIKPLLDSFSDSEDLNKSNDFSDHENGRLSFDSPKEGDIELDKSKIMGQTKKQEMQKDLVRETSPSNTPKALLNKSSRFFSASFFSFTVDGTEFTPASVFRSLMEFSRKHLPKVVVGLLLFGGATFVAIHAERGPQLFQQEDVVTSSIEEVSSKPLVHQLRNLPKRVKKLIAMLPHQEVNEEEASLFDMLWLLLASVIFVPLFQRIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHFLCGQLGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAVVAISAIIAGGRLLLRPIYKQIAENRNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLISNFPVVTGSLGLLIGGKTLLVALVGKLFGISIISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFELHDVRSLLPDERETDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELSELCEASGSSLGYGFSRMMSKSKPQSPDSSEENQIIEGTLAI 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15260789 15272171 - Bpe010619.1 Bpe13g00937 113717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00937 1214 Gene3D - 606 992 IPR038770 -
Bpe13g00937 1214 Gene3D - 1014 1178 - -
Bpe13g00937 1214 MobiDBLite consensus disorder prediction 135 165 - -
Bpe13g00937 1214 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1015 1156 IPR036291 -
Bpe13g00937 1214 MobiDBLite consensus disorder prediction 437 458 - -
Bpe13g00937 1214 Coils Coil 291 339 - -
Bpe13g00937 1214 MobiDBLite consensus disorder prediction 260 275 - -
Bpe13g00937 1214 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 1 1214 - -
Bpe13g00937 1214 MobiDBLite consensus disorder prediction 142 165 - -
Bpe13g00937 1214 Pfam TrkA-N domain 1019 1132 IPR003148 GO:0006813
Bpe13g00937 1214 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 617 897 IPR004771 GO:0006812|GO:0008324|GO:0016021
Bpe13g00937 1214 Coils Coil 164 184 - -
Bpe13g00937 1214 Coils Coil 361 381 - -
Bpe13g00937 1214 ProSiteProfiles RCK N-terminal domain profile. 1018 1140 IPR003148 GO:0006813
Bpe13g00937 1214 MobiDBLite consensus disorder prediction 256 275 - -
Bpe13g00937 1214 Pfam Sodium/hydrogen exchanger family 615 986 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe13g00937 1214 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 1 1214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01537 Bpe-Chr2:18478444 Bpe13g00937 Bpe-Chr13:15260789 2.00E-31 dispersed
Bpe12g00718 Bpe-Chr12:12706920 Bpe13g00937 Bpe-Chr13:15260789 6.43E-77 dispersed
Bpe13g00937 Bpe-Chr13:15260789 Bpe11g00238 Bpe-Chr11:1630882 1.75E-09 dispersed
Bpe13g00937 Bpe-Chr13:15260789 Bpe14g00259 Bpe-Chr14:2693269 4.56E-38 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00937 - - jre:109012107 1654.8