Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00946 TTGTTTCCAATGAGATCTGGGTCTGGTCCTTTAGCTGCCCCAGATATCACTGGGGTGTCCACCTATGGCGGACGATACATTCAGTACAACGTGTACGGGAATCTCTTTGAAGTTTCCAGTAAGTACGTACCACCTATTCGACCGCTTGGGAGGGGTGCTTATGGTATTGTCTGTGCTGCTGTGAATTTGGAGACAAGAGAGGAGGTGGCCATCAAGAAGGTTGGTAATGCATTTGACAACAGAATAGATGCCAAAAGGACTTTGCGAGAAATTAAACTTCTTTTGCACATGGATCATGAAAATGTCATTGCAATTAAAGATATTATACGACCTCCATTGGTAGAAAACTTTAATGATGTGTACGTGGTTTATGAGCTGATGGACACAGATCTCCATAAGATAATAAGATCGAATCAACCGTTGACAGATGATCATTGCCGGTTTTTTCTGTACCAGTTGTTACGAGGGCTAAAATACGTCCATTCTGCCAATGTTCTGCATCGCGATCTAAAGCCAAGCAATTTATTTCTGAATGCAAACTGTGACCTTAAGATTGGAGACTTTGGGCTTGCAAGGACAACATCCGAGACAGATTTCATGACTGAATATGTTGTTACTCGGTGGTACCGTGCACCGGAATTGCTCCTTAATTGTTCAGAATACACAGGAGCAATTGATATTTGGTCGGTAGGATGTATATTAGCTGAAATCAACACGAGGCAACCACTCTTTCCGGGCAGAGACTATATTCATCAGCTCAAACTCATCACCGAGCTGATTGGTTCACCGGACGAATCTAGCCTTGGATTCTTACGAAACGATAGTGCACGAAGATATGTTCGACAACTTCCTCAGCATCCAATGCAACAATTTTCCTCTCGGTTTCCAACTATGTCACCTGCGGCTGCTGATTTACTAACGAAGATGCTCGTATTCGATCCGAGCAAACGCATCACTGTAGAAGAGGCGCTTTGTCACCAATACGTGGCTTCTCTTCATGTTATCAATGAGGAACCAGTCTGTCCAAGGCCATTCAGTTTTGATTTTGAGCAGCCGTCGTATACAGAAATAAACATCAAAGAGCTCATATGGAGGGAGTCTGTCAGGTTCAATCCCGATCCAACCCATTAA 1131 43.5 LFPMRSGSGPLAAPDITGVSTYGGRYIQYNVYGNLFEVSSKYVPPIRPLGRGAYGIVCAAVNLETREEVAIKKVGNAFDNRIDAKRTLREIKLLLHMDHENVIAIKDIIRPPLVENFNDVYVVYELMDTDLHKIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILAEINTRQPLFPGRDYIHQLKLITELIGSPDESSLGFLRNDSARRYVRQLPQHPMQQFSSRFPTMSPAAADLLTKMLVFDPSKRITVEEALCHQYVASLHVINEEPVCPRPFSFDFEQPSYTEINIKELIWRESVRFNPDPTH 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15344080 15348033 + Bpe010628.1 Bpe13g00946 113726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00946 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Bpe13g00946 376 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00946 376 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Bpe13g00946 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 375 - -
Bpe13g00946 376 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00946 376 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Bpe13g00946 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 18 375 - -
Bpe13g00946 376 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Bpe13g00946 376 CDD STKc_TEY_MAPK 36 372 - -
Bpe13g00946 376 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00946 376 SUPERFAMILY Protein kinase-like (PK-like) 46 335 IPR011009 -
Bpe13g00946 376 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00667 Bpe-Chr11:5124719 Bpe13g00946 Bpe-Chr13:15344080 0 dispersed
Bpe11g00794 Bpe-Chr11:5943999 Bpe13g00946 Bpe-Chr13:15344080 0 dispersed
Bpe13g00788 Bpe-Chr13:14290186 Bpe13g00946 Bpe-Chr13:15344080 2.61E-123 dispersed
Bpe13g00946 Bpe-Chr13:15344080 Bpe04g01188 Bpe-Chr4:13954342 1.81E-107 dispersed
Bpe13g00946 Bpe-Chr13:15344080 Bpe11g01839 Bpe-Chr11:14808273 0 transposed
Bpe13g00946 Bpe-Chr13:15344080 Bpe10g00757 Bpe-Chr10:13852970 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63679 PF00069 Pkinase 1.40E-69 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00946 K20600 - csin:114309362 667.537