Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00969 ATGGGGAGCAACGAAGAAGGAAAATCTTCTAAATCGGAAAAATCATCTTCACCATCACATCCCCAGGATCAGACAAATCCGGCTCAGCAAGCTAATATTCAAGTCTATCCTGATTGGGCAACCTTGCAGGCATACTATGGTCCTAGAGTTACACTTCCACCATATTACAACTCGGCCGTGGCTTCAGGTCATGCTCCGCATCCTTACATGTGGGGGCCACCTCAGGCCATGATGTCGCCTTATGGAGCACCCTATGCAGCAATTTACTCACATGGAAGTGTGTATGCCCATCCAGCTGTAACTCTTGGTCCACATTCACAAGCTCATGGGGTACCCACTTCACCAATTACTGCTGGAACTCCTTTGAATGCTGAAACTCCAAAGTCCACCGGAAACACAAATGGAGGTCTGATGAAAAAACTAAAACGGTTTGATGGACTCGCAATGTCAATAGGCAATGGTAATTCCCAGAATGCAGATGGTGGAGTAGAAAATATGCTGTCGCAGAGTGGAGAAACAGATGGTTCAAGTGATGGAAGTGATGTTAACATGGCCGTGGCTAGTCAACCAAGAAGGAAAAGAAGCAGAGAGGGAACACCAACTCCCGGCAAAGATGAGAAAAGTGAGTCACAGGACACTTCCGTTATTGCTGGGGAGATAACCGGTGCTTCTGATAAAGTAGTGGGCACAGCTATTACCTCTTGTGTGACGGGAAAATTAATTGGACCTCTGGGTTCGCCAATGTCAACTGCTTTGGAGCTCAAGAACCCTGTTAGTGCAAATATGATAACGGCAACCACTGTTCCTCAAGCTTGTCCTGTATTGCCTGAAAGTTGGATGCAGAATGAAAGAGAACTAAAACGTGAAAGGAGAAAACAATCTAATAGAGAATCTGCTAGGCGGTCAAGGTTGAGGAAACAGGCTGAAACTGAGGAGCTAGCACAGAAGGTTGATTCCCTGACGGCTGAAAAGGAGGCCATTAGATCTGAAATTAATCGTTTGACTGAAAAATCAGGGAAACTCAAGCAAGAAAATGTCGCCCTATTGGAGAAACTTAAAACCGTGCAAACTGGTCGAAGAAAAGATGTTACTACCGAGAAGGTGGAAAATCTACTATCAAGAGTAAACAATTCAGATTCTGTGGAAAGAAGCTTTGATGAGGAGAATAACATGTACAAAAAATCATCGAATTCCAACGTGAAGCTGCGACAACTCTTGGGTGCAAGTCCGAGGACAGACGCGGTGGCTGCCGGATGA 1257 45.35 MGSNEEGKSSKSEKSSSPSHPQDQTNPAQQANIQVYPDWATLQAYYGPRVTLPPYYNSAVASGHAPHPYMWGPPQAMMSPYGAPYAAIYSHGSVYAHPAVTLGPHSQAHGVPTSPITAGTPLNAETPKSTGNTNGGLMKKLKRFDGLAMSIGNGNSQNADGGVENMLSQSGETDGSSDGSDVNMAVASQPRRKRSREGTPTPGKDEKSESQDTSVIAGEITGASDKVVGTAITSCVTGKLIGPLGSPMSTALELKNPVSANMITATTVPQACPVLPESWMQNERELKRERRKQSNRESARRSRLRKQAETEELAQKVDSLTAEKEAIRSEINRLTEKSGKLKQENVALLEKLKTVQTGRRKDVTTEKVENLLSRVNNSDSVERSFDEENNMYKKSSNSNVKLRQLLGASPRTDAVAAG 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15522413 15525796 + Bpe010651.1 Bpe13g00969 113749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00969 418 Pfam Disordered region downstream of MFMR 136 262 - -
Bpe13g00969 418 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Bpe13g00969 418 Pfam bZIP transcription factor 283 345 IPR004827 GO:0003700|GO:0006355
Bpe13g00969 418 MobiDBLite consensus disorder prediction 391 405 - -
Bpe13g00969 418 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 348 IPR004827 GO:0003700|GO:0006355
Bpe13g00969 418 Coils Coil 303 351 - -
Bpe13g00969 418 MobiDBLite consensus disorder prediction 118 136 - -
Bpe13g00969 418 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 418 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bpe13g00969 418 MobiDBLite consensus disorder prediction 14 34 - -
Bpe13g00969 418 MobiDBLite consensus disorder prediction 382 418 - -
Bpe13g00969 418 MobiDBLite consensus disorder prediction 283 316 - -
Bpe13g00969 418 MobiDBLite consensus disorder prediction 118 213 - -
Bpe13g00969 418 Gene3D - 286 338 - -
Bpe13g00969 418 PANTHER G-BOX-BINDING FACTOR 3 1 418 - -
Bpe13g00969 418 SUPERFAMILY Leucine zipper domain 286 343 IPR046347 GO:0003700|GO:0006355
Bpe13g00969 418 MobiDBLite consensus disorder prediction 190 212 - -
Bpe13g00969 418 SMART brlzneu 283 347 IPR004827 GO:0003700|GO:0006355
Bpe13g00969 418 MobiDBLite consensus disorder prediction 1 34 - -
Bpe13g00969 418 CDD bZIP_plant_GBF1 288 337 IPR045314 GO:0003700|GO:0006355
Bpe13g00969 418 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
Bpe13g00969 418 MobiDBLite consensus disorder prediction 150 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00107 Bpe-Chr10:1859362 Bpe13g00969 Bpe-Chr13:15522413 1.07E-47 dispersed
Bpe11g00296 Bpe-Chr11:2164892 Bpe13g00969 Bpe-Chr13:15522413 5.54E-45 dispersed
Bpe13g00969 Bpe-Chr13:15522413 Bpe11g01672 Bpe-Chr11:12966482 2.51E-08 dispersed
Bpe13g00969 Bpe-Chr13:15522413 Bpe04g00934 Bpe-Chr4:6265497 6.16E-112 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22335 PF16596 MFMR_assoc 8.50E-21 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00969 K09060 - jre:108996456 498.049