Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g00995 ATGGAAAGCCACCCAGTTCAGCTTTTTAATTTTCAGCTCGCTTTGGCGATAATCTTTGTTGTGTTTCTATTGATTTCTACGGCGGAACAGCCGGGCGTTCAGTCCATTGCAACCGATACAGAAGCTCTTCTGATGCTGAAGAATATGATCGACAAAGACCCAAATGGAGTTCTGTCGAGTTGGCAGCTCCACAAGAATCCATGCACTTGGATTGGAGTTTCATGCTCGTCTGGGCGAGTAACTAAGCTCGATCTCAGCGGCTATAATCTCGACGGAACTCTCTCTTTTGATCCGTTTGTTTCTCTAAATATGCTGTCTGTTCTGAAATTGTCATCAAATTCGTTCATCATAAACTCAACAAATCTGCTTCAGCTCCCAGACAGTTTGCAGCAGCTTGAACTGTCTTTGGTTAGACTCGTCGGCAATGTTCCTCAAAATCTTTTCTCCAAATGTCCTAATCTTGTTTATGTAAACCTTGGATTCAACAATTTGACAGGGCCTTTGCCTGAAAATCTGCTGCTGAATTCTAACAAGCTTCAGGCTCTTGATCTCTCTTACAACAATCTTAGCGGATCCATCTCTGGTTTGAAACTCGAACCTGATTCTTGCGGGGCTTTGTGGCATCTCGATCTTTCTGGGAATCGTTTAACGGGTTCGATCCCGATTGGCATTTCAAACTGCTCGAATCTTCAAACTCTGAGTTTATCGTATAATTTTCTGACAGAGGAAATTCCAGATTCTGTTGGGGAGCTAGACAGCCTGCAAAAGCTGGATATTTCGCACAATCAGCTCACCGGCTGGATCCCTTCGGAGTGGGGAAACGCCTGCAATTCCCTCGCCGAGCTTCGGCTTTCGTATAACAACATTTCGGGTCCGATTCCATCTTCCTTCGTTTCGTGTGATTTGCTGCAAGTTTTCGATCTTTCGAACAACAATATCTCGGGTCCTCTGCCATTTTCAATCTTTAAGAATCTTCTCTCACTAGAGAGCTTGCTTTTGAGTAATAACATTATATCTGGGCCATTTCCTGCATCTATATCATCTTGCAAGAAATTGCAGATTGTAGATTTGAGCTCCAACAAGATTTCAGGCACAATTCCACCCGACATCTGTCCTGGTGCAGAGTCACTCGAGGATCTGAGAATACCGGATAATCTCATCACAGGAGGAATCCCATCTCAATTGGCTCTTTGCAAACAGCTTAAGACTATTGATTTCAGCCTCAACTATCTAAATGGATCAATTCCTCCAGAGCTAGGGGAGCTTGCGAATCTCGAACAGTTTATCGCTTGGTTCAACAGCTTGGATGGGAAAGTCCCACCAGAGTTGGGTAAATGCAAAAGACTGAAGGATCTCATTATCAACAACAACCGCCTCGCTGGAGAAATTCCGGCTGAATTGTTCAATTGCACCAATCTTGAATGGATTTCGCTCACAAGCAATGAGCTAACAGGCGAAGTGCCGAAAGAATTCGGGCTTCTGACGAGGCTGGCCGTTCTGCAGCTTGGGAATAATAGCTTAAGTGGGCAAATCCCAGGTGAGCTAGAGAATTGCAGCACTTTGGTTTGGCTGGACTTGAACAGCAATAAGCTTACCGGAGAGATTCCTCCTAGACTTGGAAGGCAGCCTGGAGCGAAATCGTTGAACGGAATTCTCTCTGGAAACACTCTAGTTTTCGTTCGAAACGTGGGAAATTCATGTAAAGGAGTGGGAGGATTGCTAGAGTTTGCAGGGATTCGACCGGAAAGATTGTTGCAGGTTCCTACATTGAAGAGTTGTGATTTCACAAGACTGTATTCTGGTCCAGTTCTTAGCCTCTTCACAAAATATCAAACTCTGGAGTATCTGGATCTTTCTTACAACGAGCTCCGAGGAAGAATTCCGGTAGAATTCGGGGACATGGTGGCCATGCAAGTTCTGGAATTATCCCACAATCAACTTTCCGGTGAGATCCCGGAATCACTCGGCCGTCTTAAAAACTTAGGAGTCTTTGATGCCTCTAATAACAGATTTCAAGGTCATATTCCTGATTCTTTCTCTAATCTATCGTTCTTGGTCCAAATTGACTTGTCAAACAACGAATTAACGGGCCAAATTCCGTCAAGAGGCCAGCTAAGTACACTTCCAGCGAGTCAGTATGCGAATAATCCAGGACTCTGTGGGGTTCCCTTGCCTGAATGTGGGAATGAAGACCAATCATCCACGAACCCTAGCGAGGCGACATGGAAGGGAAGACGAAAGGCCGAAACTGCGTCTTGGGCGAATAGCATTGTAATGGGCGTACTCATTTCCGTCGCCTGCATTTGCATTTTGATAGTATGGGCAATCGCCATGCGAGCAAGACGGAAAGAGGCAGAGGAGGCCAAAATGCTTACGAGTTTGCAAGCGTCACACGCAGCCACTACATGGCAAATTGACAAAGAGAAAGAGCCCCTTAGCATTAACGTAGCCACTTTCCAGAGGCAGCTTAGGAAGCTCAAATTCTCCCAATTGATCGAGGCCACCAATGGGTTTTCAGCGGCCAGCCTCATCGGCAGCGGCGGATTCGGAGAAGTTTTCAAGGCGACGTTGAAAGACGGGTCTAGCGTCGCCATCAAGAAGCTAATACGATTGAGCTGTCAAGGCGACCGGGAATTCATGGCCGAAATGGAAACTTTGGGAAAAATCAAGCATCGGAATCTCGTTCCTCTTCTGGGTTACTGCAAGGTCGGCCAAGAGCGGCTTCTGGTGTATGAATTCATGGAGTTTGGAAGCCTTGAAGAGATGCTGCACGGCCGTGCGAGAACACAAGAACAACGGATTCTGACATGGGAGGAGAGGAAAAAGATTGGAAGAGGAGCAGCGAAAGGGCTCTGCTTCCTTCACCATAATTGCATCCCACACATTATACACAGAGACATGAAGTCCAGCAACGTACTTTTGGACCATGAAATGGAGGCCAGAGTGTCCGATTTCGGCATGGCTAGGCTCATAAGCGCACTGGACACTCATCTGAGCGTAAGCACCCTGGCGGGAACCCCCGGCTATGTGCCGCCGGAGTACTACCAGAGTTTCAGGTGCACGGCTAAAGGCGACGTCTATTCATTCGGCGTCGTCCTCTTGGAGCTCCTGACGGGGAAGCGGCCGACAGACAAGGAGGATTTCGGAGACACAAATCTGGTGGGGTGGGTGAAAATGAAGGTAAAAGAAGGAAAGCAAATGGAGGCCATAGACCCAGAATTGCTCTCCGTCAGCAAAGGAACGGCCGAAGCGGAGGCCGAAGAGGTAAAGGAAATGGTGCGTTACTTGGAGATAACTCTGCGGTGTGTTGAAGAATTGCCGTCCAGGCGACCAAATATGTTGCAGGTGGTGAGTATGCTGCGCGAGCTGATGCCGGGCTCGGCCAACGGAAGCAGCAACAGCGCTTGA 3408 47.45 MESHPVQLFNFQLALAIIFVVFLLISTAEQPGVQSIATDTEALLMLKNMIDKDPNGVLSSWQLHKNPCTWIGVSCSSGRVTKLDLSGYNLDGTLSFDPFVSLNMLSVLKLSSNSFIINSTNLLQLPDSLQQLELSLVRLVGNVPQNLFSKCPNLVYVNLGFNNLTGPLPENLLLNSNKLQALDLSYNNLSGSISGLKLEPDSCGALWHLDLSGNRLTGSIPIGISNCSNLQTLSLSYNFLTEEIPDSVGELDSLQKLDISHNQLTGWIPSEWGNACNSLAELRLSYNNISGPIPSSFVSCDLLQVFDLSNNNISGPLPFSIFKNLLSLESLLLSNNIISGPFPASISSCKKLQIVDLSSNKISGTIPPDICPGAESLEDLRIPDNLITGGIPSQLALCKQLKTIDFSLNYLNGSIPPELGELANLEQFIAWFNSLDGKVPPELGKCKRLKDLIINNNRLAGEIPAELFNCTNLEWISLTSNELTGEVPKEFGLLTRLAVLQLGNNSLSGQIPGELENCSTLVWLDLNSNKLTGEIPPRLGRQPGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLLQVPTLKSCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPVEFGDMVAMQVLELSHNQLSGEIPESLGRLKNLGVFDASNNRFQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPECGNEDQSSTNPSEATWKGRRKAETASWANSIVMGVLISVACICILIVWAIAMRARRKEAEEAKMLTSLQASHAATTWQIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGQERLLVYEFMEFGSLEEMLHGRARTQEQRILTWEERKKIGRGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVKEGKQMEAIDPELLSVSKGTAEAEAEEVKEMVRYLEITLRCVEELPSRRPNMLQVVSMLRELMPGSANGSSNSA 1135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15696103 15699510 - Bpe010678.1 Bpe13g00995 113775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g00995 1135 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 26 1124 - -
Bpe13g00995 1135 Pfam Leucine Rich repeat 176 191 IPR001611 GO:0005515
Bpe13g00995 1135 SMART LRR_typ_2 203 227 IPR003591 -
Bpe13g00995 1135 SMART LRR_typ_2 349 373 IPR003591 -
Bpe13g00995 1135 SMART LRR_typ_2 251 274 IPR003591 -
Bpe13g00995 1135 SMART LRR_typ_2 446 470 IPR003591 -
Bpe13g00995 1135 SMART LRR_typ_2 634 658 IPR003591 -
Bpe13g00995 1135 SMART LRR_typ_2 494 518 IPR003591 -
Bpe13g00995 1135 Gene3D Phosphorylase Kinase; domain 1 797 913 - -
Bpe13g00995 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Bpe13g00995 1135 Gene3D Transferase(Phosphotransferase) domain 1 914 1132 - -
Bpe13g00995 1135 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 1124 - -
Bpe13g00995 1135 Pfam Brassinosteroid receptor island domain 549 607 IPR045381 -
Bpe13g00995 1135 PRINTS Leucine-rich repeat signature 179 192 - -
Bpe13g00995 1135 PRINTS Leucine-rich repeat signature 251 264 - -
Bpe13g00995 1135 Pfam Protein kinase domain 841 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00995 1135 ProSiteProfiles Protein kinase domain profile. 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g00995 1135 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Bpe13g00995 1135 Gene3D Ribonuclease Inhibitor 169 728 IPR032675 -
Bpe13g00995 1135 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Bpe13g00995 1135 SUPERFAMILY L domain-like 595 724 - -
Bpe13g00995 1135 SUPERFAMILY RNI-like 244 549 - -
Bpe13g00995 1135 SUPERFAMILY L domain-like 61 319 - -
Bpe13g00995 1135 SUPERFAMILY Protein kinase-like (PK-like) 819 1120 IPR011009 -
Bpe13g00995 1135 Gene3D - 552 608 - -
Bpe13g00995 1135 Gene3D Ribonuclease Inhibitor 38 149 IPR032675 -
Bpe13g00995 1135 Pfam Leucine rich repeat 606 647 IPR001611 GO:0005515
Bpe13g00995 1135 Pfam Leucine rich repeat 208 264 IPR001611 GO:0005515
Bpe13g00995 1135 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Bpe13g00995 1135 SMART serkin_6 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01083 Bpe-Chr2:13994745 Bpe13g00995 Bpe-Chr13:15696103 4.43E-07 dispersed
Bpe03g00294 Bpe-Chr3:3991704 Bpe13g00995 Bpe-Chr13:15696103 2.77E-46 dispersed
Bpe08g01164 Bpe-Chr8:13399641 Bpe13g00995 Bpe-Chr13:15696103 2.23E-52 dispersed
Bpe10g00236 Bpe-Chr10:8793021 Bpe13g00995 Bpe-Chr13:15696103 9.39E-31 dispersed
Bpe13g00995 Bpe-Chr13:15696103 Bpe02g00068 Bpe-Chr2:532109 4.01E-53 dispersed
Bpe13g00995 Bpe-Chr13:15696103 Bpe06g00118 Bpe-Chr6:1906214 4.75E-157 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63681 PF00069 Pkinase 1.50E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g00995 - - csv:101208987 1844.71