Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01005 AAAACAATGAATGATGCAGCAGTGAAGATGGCTCTGAGCAGCCTCGGAAGAGGCTTCGATTTAACCTCAGATTTCAGGCTCAAATTCTGTAAAGGCCATGAACGACTAGTTCTCCTCAACGAAGCCCAGAAACGAGAGCTTTCGGTCCCTGGTTTCGGCTCCGTCGCCGACGTCTCCGTCGATATAAAGTGCAGCAAAGGCGATCAGATTCGCTACCAATCCGATATTCTCAGCTTCAACCAGATGTCTGAACTTTTTAACCAGAAAAGCTCCATTCCTGGAAAGATTCCGTCAGGATTCTTTAACGCCATGTTTGGATTTCAAAGTGGATGCTGGGCAAGTGACGCAGAAAATATTAAGAATCTAGGTCTCGATGGATTTTTTGTTACCCTTTTCGATGTCCATATCGACCGTTACCGTATCGTTCTTGCAGACGAAGTCCGGGAAGCCGTTCCGACTTCCTGGAATCCCAGTGCACTGGCAAGATTCATCGAGAAGTACGGGACCCACATAATCGTGGGGCTGAGCATGGGAGGACATGATATGGTTCTAGTGAGGCAAGAAAGATCATCGAAAGTGGAAGCATCAGAGCTGAAGAAGTATCTTCAAGATCTTGGAGATCAGCTGTTCAATGGAACCTGCAATTTCTCCCCACTTGACTCCAAAGCTAAAGACAATAGAACCAAGGCTCCTCAGGCTTTTAACTTGTTTGATACACCTACTGTTGCCTTCACCGACTTCTCTTCTATCAGCACGAAAGATGGAATAACAGTGATATGCTCAAAAAAGGGAGGGTGTACAGCAGAAAGTAACCACAGTGGATGGCTTCCTACAGTGCCTTCATCCCCCGATGCAATTTACTTTCGCTTCATCCCCATTACCTCTCTCCTAAATGGTGTCAATGGAAAAGGGTTTCTCTCTCATGCCATCAACCTCTATCTTCGCTACAAGCCTCCAATAGATGATCTACCCTACTTTCTGGACTTTCAAGTACACAAGATTTGGGCTCCAATTCACAACGAGCTACCCTTAAATCCAGCTCCAAATATGACTTCATCACCATCTCTGCATTTCAACATGATGGGTCCTAAGCTCTACATCAACACTTCTCGGGTTATGGCTGGGAAGAGTCCTGTGACAGGGATGAGACTTTATCTTGAAGGCATCAAATGCAACAGACTGGCCATACACATCCAACATCTATCAAAGGCACCCTTCTTCCTAGAAAACAAGATAGAAGAAGACACGTCATCATATTGCAGAGGATCAGAAGACAATGAAGAAGAAGGATACCTAGAACCAATCAATGGAAGAAGATTCTCCCATGTCTGTACAGCTCCAGTCAAATATGATCCAAAATGGGCTTCAAAAGAAGACGCATCTTTCATAGTTACCGGAGCTCAATTGCAAATATCCAAAAAAGAAGACTCAAGACATGTTCTCCATCTCAAGCTTTTCTACTCCAAACTCTCACATTCTCATGTTGCTCAGTCAAACTGGACAAGAGGGTCTTCTAGGTTTTCGCAAAATTTCGGGCTTTTCTCGTCGATAGGCACGTCAATTTCCGGCGACCTGGAAAAGAAAAAACAGCCAGCCGTGGTGATGGATTCGAGTGTTTTCCCAACGGGACCTCCAGTGCCGATGCAGACTAGGAAACTTTTGAAGTTTGTTGATGTTTCAGAGATTTTTAAAGGCCCTCAAGATAGTCCTGGACATTGGTTAGTGACCGGAGCCAGGCTTTATTTGGAGAAAGGAAAGATATGCTTGCATGTTAAATTTTCTCTGTTACACATTTATTCA 1800 44.44 KTMNDAAVKMALSSLGRGFDLTSDFRLKFCKGHERLVLLNEAQKRELSVPGFGSVADVSVDIKCSKGDQIRYQSDILSFNQMSELFNQKSSIPGKIPSGFFNAMFGFQSGCWASDAENIKNLGLDGFFVTLFDVHIDRYRIVLADEVREAVPTSWNPSALARFIEKYGTHIIVGLSMGGHDMVLVRQERSSKVEASELKKYLQDLGDQLFNGTCNFSPLDSKAKDNRTKAPQAFNLFDTPTVAFTDFSSISTKDGITVICSKKGGCTAESNHSGWLPTVPSSPDAIYFRFIPITSLLNGVNGKGFLSHAINLYLRYKPPIDDLPYFLDFQVHKIWAPIHNELPLNPAPNMTSSPSLHFNMMGPKLYINTSRVMAGKSPVTGMRLYLEGIKCNRLAIHIQHLSKAPFFLENKIEEDTSSYCRGSEDNEEEGYLEPINGRRFSHVCTAPVKYDPKWASKEDASFIVTGAQLQISKKEDSRHVLHLKLFYSKLSHSHVAQSNWTRGSSRFSQNFGLFSSIGTSISGDLEKKKQPAVVMDSSVFPTGPPVPMQTRKLLKFVDVSEIFKGPQDSPGHWLVTGARLYLEKGKICLHVKFSLLHIYS 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 15790513 15793324 + Bpe025261 Bpe13g01005 113785

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01005 600 PANTHER OS02G0736300 PROTEIN 6 598 - -
Bpe13g01005 600 SMART MACPF_8 119 315 IPR020864 -
Bpe13g01005 600 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 598 IPR044663 GO:0006952|GO:0012501|GO:2000031
Bpe13g01005 600 Pfam MAC/Perforin domain 101 313 IPR020864 -
Bpe13g01005 600 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 327 IPR020864 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01005 - - - hbr:110646653 845.884
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe02g01969 Bpe13g01005 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00281 Bpe-Chr10:10166309 Bpe13g01005 Bpe-Chr13:15790513 9.37E-165 dispersed
Bpe11g01146 Bpe-Chr11:8506192 Bpe13g01005 Bpe-Chr13:15790513 5.36E-166 dispersed
Bpe11g01585 Bpe-Chr11:11917462 Bpe13g01005 Bpe-Chr13:15790513 3.87E-119 dispersed
Bpe04g00997 Bpe-Chr4:6954123 Bpe13g01005 Bpe-Chr13:15790513 0 transposed
Bpe13g01005 Bpe-Chr13:15790513 Bpe02g01969 Bpe-Chr2:21541826 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g515 Blo01g00773 Blo16g00758 Bda01g01794 Bda11g00189 Bpe13g01005 . . . . . . . . . . . Cpe01g01853 . . . . . . . . . . . . . . . . Cone6ag0353 . . Csa05g01977 . . . . . Bda11g00189 . Bpe02g01969 Bma01g00490 Bma06g01133 . Cmo04g02227 . Cma04g02134 . Car04g02071 . . . Bhi12g00955 . . . Hepe02g2611 . Lcy10g1378 Cla01g00646 Cam01g0674 Cec01g0665 Cco01g0693 Clacu01g0662 Cmu01g0635 Cre09g1870 Lsi09g00697 . Chy09g00812 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007498 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe13g01005 Bpe_Chr13 FPKM 14.666411 16.410664 15.013786 16.250345 11.73645 10.606147 10.846534 36.25745 34.424515 38.236958