Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01035 ATGGTGGAAAGAGCGTCAAATAGGGGTGGCGCTGGCCAATCGTCCGGTCATAGTTGCGGCCCCAGAGCTCCAAGCGTTAGAGACACTATCTGCCACGCCGGTGCCGGTGCCGCATCAGGTGCTATTGCTGCTACGTTCGTATGCCCTTTGGATGTGATAAAGACGAGATTGCAGGTTTATGGTCTTCCTTCTGGACATAGAGGTAATGTCATAATTACAAGCTTAAAGGACATCATCCGTGCTGAAGGCTTGAGGGGAATGTATCATGGTCTTTCTCCAACAATTATTGCTCTTCTTCCAAACTGGGCAGTTTACTTCACAGTATATGAGCATCTTAAAGGTCTACTCCATTCAAATGGTCATGGTGACCAACTCTCATTGGGTGCAAATATGTTTGCTGCCGCTAGTGCAGGGGCTGCCACTGCCCTCACCATGAATCCATTGTGGGTTGTTAAAACTAGACTCCAAACCCAGGGAATGAGGTCCGGTGTGGTACCTTATACAGGAATACTTTCAGCGTTCAGAAGGATTGTACACGAGGAAGGAGTGAGAGGACTTTATAGTGGAATCATCCCTTCATTGGCCGGGGTAAGTCATGTTGCAATACAATTTCCTGCGTACGAGAAGCTCAAATTTTACTTGGCACAAAGGGAAAACACAACCACTAATAAGCTAGGCCCTGGAAGTGTAGGCATTGCCTCTGCCATTTCCAAAATCACTGCTTCTTTATTAACCTATCCTCATGAGGTGATTCGTTCTCGTCTTCAAGAGCAAGGACAACAAGTGAGAACTGTCGGGATTCAATATACCGGGGTGATAGATTGCGTAAAAAAAGTGTTGGAAAAGGAAGGTTTTTGCGGATTTTATCGGGGTTGCGCTACCAATCTTCTGCGAACAACCCCATCGGCCGTTATAACTTTTACTAGTTATGAGATGATATGCCAATTCCTCCAGCAACTTTTTCCGTCGGAAAATGGTGAGAGTTCATACCAAAGATAA 999 45.85 MVERASNRGGAGQSSGHSCGPRAPSVRDTICHAGAGAASGAIAATFVCPLDVIKTRLQVYGLPSGHRGNVIITSLKDIIRAEGLRGMYHGLSPTIIALLPNWAVYFTVYEHLKGLLHSNGHGDQLSLGANMFAAASAGAATALTMNPLWVVKTRLQTQGMRSGVVPYTGILSAFRRIVHEEGVRGLYSGIIPSLAGVSHVAIQFPAYEKLKFYLAQRENTTTNKLGPGSVGIASAISKITASLLTYPHEVIRSRLQEQGQQVRTVGIQYTGVIDCVKKVLEKEGFCGFYRGCATNLLRTTPSAVITFTSYEMICQFLQQLFPSENGESSYQR 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16031826 16034947 + Bpe010716.1 Bpe13g01035 113815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01035 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 316 IPR018108 -
Bpe13g01035 332 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 24 326 - -
Bpe13g01035 332 Gene3D Mitochondrial carrier domain 11 121 IPR023395 -
Bpe13g01035 332 Gene3D Mitochondrial carrier domain 122 326 IPR023395 -
Bpe13g01035 332 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Bpe13g01035 332 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085
Bpe13g01035 332 PRINTS Mitochondrial carrier protein signature 45 59 IPR002067 GO:0055085
Bpe13g01035 332 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Bpe13g01035 332 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Bpe13g01035 332 Pfam Mitochondrial carrier protein 124 216 IPR018108 -
Bpe13g01035 332 Pfam Mitochondrial carrier protein 32 118 IPR018108 -
Bpe13g01035 332 Pfam Mitochondrial carrier protein 228 318 IPR018108 -
Bpe13g01035 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 115 IPR018108 -
Bpe13g01035 332 MobiDBLite consensus disorder prediction 1 21 - -
Bpe13g01035 332 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 24 326 IPR044712 GO:0006862|GO:0055085
Bpe13g01035 332 SUPERFAMILY Mitochondrial carrier 27 312 IPR023395 -
Bpe13g01035 332 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 213 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00209 Bpe-Chr7:1460555 Bpe13g01035 Bpe-Chr13:16031826 4.45E-11 dispersed
Bpe10g00131 Bpe-Chr10:2458439 Bpe13g01035 Bpe-Chr13:16031826 4.53E-15 dispersed
Bpe11g00156 Bpe-Chr11:1089849 Bpe13g01035 Bpe-Chr13:16031826 7.43E-128 dispersed
Bpe13g01035 Bpe-Chr13:16031826 Bpe14g01347 Bpe-Chr14:10743975 5.95E-08 dispersed
Bpe15g01143 Bpe-Chr15:20411951 Bpe13g01035 Bpe-Chr13:16031826 8.27E-24 dispersed
Bpe13g01035 Bpe-Chr13:16031826 Bpe02g01241 Bpe-Chr2:15981386 3.81E-12 transposed
Bpe13g01035 Bpe-Chr13:16031826 Bpe14g00576 Bpe-Chr14:4884526 8.13E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01035 K15115 - csv:101216902 450.284