Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01039 ATGCATTTGGTTTTGCTGGTTCTTCTTCTATACGGTGTTGATAGTCCAGTGAGTTCTTTAAATGAGGAAGGGTTTGCCCTGGTCTCCTTCAAGCAGTCCATTACAGAAGACCCCGAAGGTTCTCTGAGTAACTGGAACTTTTCTGATTCCAGCCCTTGTTCTTGGAATGGAATAACATGCAAGGAGCAGAGAGTCGTCTCTCTTAGCATTCCCAAAAAGAGACTCCATGGATTTCTTCCTTCTGTTCTTGGATCTCTCTCTCAGCTCCGCCATTTAAATTTGAGGAACAATAATCTTGATGGAAATTTGCCTGCTGAGCTTTTTCGAGCTGAGGGGCTTCAGAGTTTAGTTCTTTCCGGAAATTCGTTTTCTGGGTCTGTTCCAAATGATATAAGGAAGCTTAATTACCTTCAAACTTTGGATCTGTCCCAAAATTTCTTTAATGGGTCCCTGCCAAATTCGATTATCAAGTGCAAGAGACTAAAAACCCTTTATCTTAGTCAGAATAATTTTAGTGGGTCTCTTCCTGAAGGCCTTGGTACTAGTTTGAGTTCTCTGGAGAAGTTTGATCTTTCATATAATAGATTTAGTGGTTCTATTCCTAGTGATATAGGAAATCTATCAAATCTGCAAGGCACAGTTGATTTTTCTCATAATGATTTCTCTGGTTCAATCCCAGCTAGCCTTGGAAAACTGCCTGAAAAAGTTTATATTGATCTATCTTACAACAATTTCAGTGGTTCTATACCACAAAATGGAGCTCTTATAAACAGAGGACCAACAGCTTTCATTGGAAATCCTGGACTTTGTGGCCCTCCATCGAAGAACCCATGTTCTTCAGAACCTCCTTCCTCAATTCCCTATCTCCCAGACAATTCCCAACCCGAAAACTCAGATGAAAGCAGAAAGGCAAGGGGATTGAGTACGATTGCTGTAATTGTGATCGCTTCGAGTGATGTAATTGGTATTGGCTTACTTGGATTGCTCTTTGCATACTGTTATTCAAGATTATGTCTGCCTAAGAAGAGCAAGGAAGGCTCTGGCGGATATGATAATGGCAAGGGAGGGAAAGGAAGAAAGGATTGCTTCTGCTTTCGAAAAGAAGAATCCGAACCTTTATCCGATATCATCCAGCAGTATGATCTTGTACCGTTGGATTCGCAAGTGGGATTTGATCTTGATGAGCTTCTTAAGGCTTCAGCCTTTGTTTTAGGCAAAAGTGGGATGGGAATAGTGTATAAAGTTGTGCTTGAAGATGGACTTACCTTAGCTGTGAGAAGATTGGGCGAAGGAGGTTCACAGAGGTTTAAGGAGTTTCAGACGGAAGTGGAAGCCATTGGAAAGCTTAGGCATCCAAATATAGTCACACTTAGAGCTTACTACTGGTCTGTTGATGAGAAACTTCTCATTTACGATTACATACCTAATGGAAACCTCTCTACTGCCATTCATGGGAACCTCAGAACGGAGTCATTCCGACCTCTAAATTGGTCGGTCAGGCTAAAGGTAATGAAGGGGATTGCAAAAGGTTTGGTCTTTCTGCATGAGTTTAGTCCCAAAAAGTATGTCCATGGAGATTTGAAGCCTTCAAACATTCTAATAGGAGAAAACATGGAACCCCACATTTCTAATTTCGGGCTCAGCAGTCTTGCTAACATTGCAGGGGGCTCTCCAACGCTTCAATCGAGCCACGTGGGAGCCGAGAAATCACAAGAACGGCGGGAAAAGAGCAATTCATTAGAGCTCACGACCTTCGGTTCGTCACCTGGTCTTAGTTTGGGTTCATGTTACCAAGCCCCAGAAGCACTAAAAGTTGTGAAACCATCTCAAAAATGGGATGTATACTCATATGGTGTAATTTTACTAGAAATGATGACCGGAAAATCGCCATTAATTCAAGTGAGTACCTCAGAAATGGATCTAGTTCAATGGATTCAGCTTTCTGTCGACGAAAAGAAACCGCTTTCGGACGTTTTAGATCCGTATTTGGCTCGAGATGCAGATAAGGAAGAGGAGATGATTGCAGTTCAAAAAATAGCAATGGCTTGTGTTCATGGTGGCCCCGAGAAGAGACCCACAATGAGGCATGTTTCTGATGCTCTTCAGAGACTGGCCAAATCTGTGGACTGA 2130 42.25 MHLVLLVLLLYGVDSPVSSLNEEGFALVSFKQSITEDPEGSLSNWNFSDSSPCSWNGITCKEQRVVSLSIPKKRLHGFLPSVLGSLSQLRHLNLRNNNLDGNLPAELFRAEGLQSLVLSGNSFSGSVPNDIRKLNYLQTLDLSQNFFNGSLPNSIIKCKRLKTLYLSQNNFSGSLPEGLGTSLSSLEKFDLSYNRFSGSIPSDIGNLSNLQGTVDFSHNDFSGSIPASLGKLPEKVYIDLSYNNFSGSIPQNGALINRGPTAFIGNPGLCGPPSKNPCSSEPPSSIPYLPDNSQPENSDESRKARGLSTIAVIVIASSDVIGIGLLGLLFAYCYSRLCLPKKSKEGSGGYDNGKGGKGRKDCFCFRKEESEPLSDIIQQYDLVPLDSQVGFDLDELLKASAFVLGKSGMGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLSTAIHGNLRTESFRPLNWSVRLKVMKGIAKGLVFLHEFSPKKYVHGDLKPSNILIGENMEPHISNFGLSSLANIAGGSPTLQSSHVGAEKSQERREKSNSLELTTFGSSPGLSLGSCYQAPEALKVVKPSQKWDVYSYGVILLEMMTGKSPLIQVSTSEMDLVQWIQLSVDEKKPLSDVLDPYLARDADKEEEMIAVQKIAMACVHGGPEKRPTMRHVSDALQRLAKSVD 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16062213 16064726 + Bpe010720.1 Bpe13g01039 113819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01039 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Bpe13g01039 709 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 707 - -
Bpe13g01039 709 ProSiteProfiles Protein kinase domain profile. 398 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01039 709 Gene3D Ribonuclease Inhibitor 16 76 IPR032675 -
Bpe13g01039 709 Gene3D Phosphorylase Kinase; domain 1 378 473 - -
Bpe13g01039 709 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Bpe13g01039 709 SMART LRR_typ_2 158 182 IPR003591 -
Bpe13g01039 709 SMART LRR_typ_2 183 207 IPR003591 -
Bpe13g01039 709 SMART LRR_typ_2 86 110 IPR003591 -
Bpe13g01039 709 Pfam Leucine Rich Repeat 88 105 IPR001611 GO:0005515
Bpe13g01039 709 Pfam Leucine Rich Repeat 137 157 IPR001611 GO:0005515
Bpe13g01039 709 MobiDBLite consensus disorder prediction 559 580 - -
Bpe13g01039 709 MobiDBLite consensus disorder prediction 273 301 - -
Bpe13g01039 709 Gene3D Ribonuclease Inhibitor 77 281 IPR032675 -
Bpe13g01039 709 Gene3D Transferase(Phosphotransferase) domain 1 474 709 - -
Bpe13g01039 709 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 707 - -
Bpe13g01039 709 Pfam Protein kinase domain 404 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01039 709 SUPERFAMILY L domain-like 22 273 - -
Bpe13g01039 709 SUPERFAMILY Protein kinase-like (PK-like) 403 701 IPR011009 -
Bpe13g01039 709 SMART serkin_6 403 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00006 Bpe-Chr3:43856 Bpe13g01039 Bpe-Chr13:16062213 0 dispersed
Bpe13g01039 Bpe-Chr13:16062213 Bpe03g00985 Bpe-Chr3:29399732 1.89E-32 dispersed
Bpe13g01039 Bpe-Chr13:16062213 Bpe02g02022 Bpe-Chr2:21840515 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63683 PF00069 Pkinase 6.30E-31 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01039 - - qlo:115978418 1040.8