Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01052 ATGAAGAGGGAACACTGCCAGGTGAATCTTCAGCCTGACCCATCTTCAATGGCCGGGAAATCTAAGGTTTGGGAGGATGAGTCACAACGAGATGGAGGTATGGATGAACTTCTGGCTGTGTTGGGATACGAAGTGAGGTCGTCGGACATGGCCGACGTTGCCCAGAAGCTAGAACAGCTTGAAGAATTTATGGGTAATGTTCAGGAAGATGGTCTCTCGCATCTTGCGTTGGAAACTGTCCATTATAATCCCTCCGACCTTTCCACCTATCTTGAAAGCATGATTTACGAGCTTAACCCATCTCCAACTTTCGATCCCGTTGTCGGCCCGCTGTCTCAAACGCCGGTAGACGATCCGTTTCTAGCTCCGGCTGATTCCTCCATAACCTCCGTTGATTTCTCAAAACAGAGAAACCAGAGGTTGTTCGAAGGGTCTTCTTGTTCAGATTATGATCTGAAAGCTATTCCTGGTAAGGCTATTTTAAAACAAAATACTCAGTTTGAAGAAACTTCGGATAGAGAGAAGAAACGATTGAAACCCTCACCTGGGCCGGAATCGGAATTGCTTTCCGATTCAATAACTCGGTCTGTCATCCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTACACACTCTGATGGCTTGCGCCGAAGCTGTTCACCAGAACAGCCTAAATCTGGCTGAGGCTCTCCTCAAACGAGTCGGCTATCTCGCTAGGTCTCAAACCGGAGCTATGCGGAAAGTCGCCGCCTACTTCGCCGAAGCTCTAGCTCGGAGGATTTATAGGCTCTACCCCCAGAACGCCCTCGACCATTCTATTTCCGATTTGCTTCAAGTTCATTTCTACGAGAGCTGTCCTTATCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTAGAAGCTTTTGAAGGTAAAAATCGAGTCCACGTTATTGATTTTTCTATGAATCAAGGTATGCAATGGCCGGCGCTTCTTCAAGCTCTGGCTCTGCGACCTGGTGGTCCACCTATTTTCCGACTCACTGGAATTGGGCCTCCGGCGCCGGATAATTCAGATTACCTCCAAGAAGTGGGTTGGAAGCTCGCCCGATTAGCTGAAATGATTCACGTTAAGTTTGAATACCGTGGGTTTGTTGCCAACAGCTTGGCAGATCTTGATTCTTCGATGCTCGAACTTAGGCCGAGTGAGACCGAGACGGTGGCGGTCAACTCAGTTTTCGAGTTTCATAAGCTCTTGGCTCGGCCGGGAGCGATCGGAAAAGTGTTGTCAATCGTGAAGCAGATGAAGCCGGCGATTATGACTGTAGTTGAGCAAGAAGCTAGCCATAACGGCCCGGTCTTTCTGGACCGGTTCACCGAGTCACTCTACTATTACTCGACTCTTTTTGACTCGTTGGAAGGCTCAGCCACCGTTAACAATCAAGACAAGGTAATGACAGAGATGTACTTCGGGAAGCAAATATGTAACGTGGTTGCATGTGAAGACGCAGACCGGGTAGAGCGGCATGAGAATATGACTCAGTGGCGAACTCGGTTCACCTCGGCTGGGTTCAACTCGGCTTATTTAGGGTCAAACGCGTTCAAACAAGCCAGCATGTTGCTTGCTCTGTTCGGAAGTGGAGATGGGTACGGAGTAGAAGAGCGAAATGGGTGTCTGATGCTGGGCTGGCACAGCAGACCTCTGATCACCACCTCGGCTTGGACGGTGGAAGAGAAAGGAGACAGACTCAGTGAGTCGGCTCGGTGA 1752 48.97 MKREHCQVNLQPDPSSMAGKSKVWEDESQRDGGMDELLAVLGYEVRSSDMADVAQKLEQLEEFMGNVQEDGLSHLALETVHYNPSDLSTYLESMIYELNPSPTFDPVVGPLSQTPVDDPFLAPADSSITSVDFSKQRNQRLFEGSSCSDYDLKAIPGKAILKQNTQFEETSDREKKRLKPSPGPESELLSDSITRSVILVDSQENGIQLVHTLMACAEAVHQNSLNLAEALLKRVGYLARSQTGAMRKVAAYFAEALARRIYRLYPQNALDHSISDLLQVHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALLQALALRPGGPPIFRLTGIGPPAPDNSDYLQEVGWKLARLAEMIHVKFEYRGFVANSLADLDSSMLELRPSETETVAVNSVFEFHKLLARPGAIGKVLSIVKQMKPAIMTVVEQEASHNGPVFLDRFTESLYYYSTLFDSLEGSATVNNQDKVMTEMYFGKQICNVVACEDADRVERHENMTQWRTRFTSAGFNSAYLGSNAFKQASMLLALFGSGDGYGVEERNGCLMLGWHSRPLITTSAWTVEEKGDRLSESAR 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16168816 16170567 + Bpe010730.4 Bpe13g01052 113832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01052 583 Pfam GRAS domain family 209 570 IPR005202 -
Bpe13g01052 583 PANTHER DELLA PROTEIN GAI1-RELATED 2 571 IPR030006 GO:0003712|GO:0005634
Bpe13g01052 583 Gene3D - 33 98 IPR038088 -
Bpe13g01052 583 ProSiteProfiles GRAS family profile. 200 570 IPR005202 -
Bpe13g01052 583 Coils Coil 50 70 - -
Bpe13g01052 583 MobiDBLite consensus disorder prediction 164 188 - -
Bpe13g01052 583 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
Bpe13g01052 583 SMART DELLA_2 35 108 - -
Bpe13g01052 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 571 IPR005202 -
Bpe13g01052 583 MobiDBLite consensus disorder prediction 1 29 - -
Bpe13g01052 583 MobiDBLite consensus disorder prediction 167 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01376 Bpe-Chr2:17352167 Bpe13g01052 Bpe-Chr13:16168816 0 dispersed
Bpe11g01481 Bpe-Chr11:11017199 Bpe13g01052 Bpe-Chr13:16168816 1.59E-96 dispersed
Bpe13g01052 Bpe-Chr13:16168816 Bpe14g00078 Bpe-Chr14:1265882 0 dispersed
Bpe08g00454 Bpe-Chr8:2879105 Bpe13g01052 Bpe-Chr13:16168816 9.41E-147 transposed
Bpe08g01474 Bpe-Chr8:15483011 Bpe13g01052 Bpe-Chr13:16168816 2.71E-72 transposed
Bpe11g00684 Bpe-Chr11:5266596 Bpe13g01052 Bpe-Chr13:16168816 1.49E-73 transposed
Bpe13g01052 Bpe-Chr13:16168816 Bpe02g02000 Bpe-Chr2:21717752 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22342 PF03514 GRAS 3.20E-133 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01052 K14494 - tcc:18609825 838.565