Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe13g01056 | CTCTTCCTCCCTCTACTGTCAGTTGCAGAAATGGTGCAATCAAAGAAGTTCAGAGGAGTCAGGCAGAGACATTGGGGCTCATGGGTATCAGAAATTCGCCATCCGTTGCTGAAAAGAAGGGTTTGGCTTGGAACTTTTGAGACCGCAGAAGAAGCAGCCAGAGCTTACGATCAAGCAGCCATTTTAATGAGTGGAAGAAACGCAAAGACGAATTTTCCAGTCCCTCAAACTCCCACAGGCGATTCTGAGAAAAACAAACTGTCGCCATTATCGCCCAAGAGCTTATCAGAAATTCTTCACCAAAAGCTGAGAAAATGCAGCAAAACACCTTCTCCTTCAATGACTTGTTTGAGGCTAGACAATGAAAATTCCCATATCGGAGTTTGGCAAAAGCGGGCCGGGCAAAGTTCAAACTCCAATTGGGTAATGACTGTTGAGCTTGGAAAGAAGGAATCTGAACAGAATATTTCGTCTTCTTCATCATCATCGTCTTCGGATCAGCTTCCGCCATTGGAGGTAAACCCTGAGCTTCCCAGAGAGATAAATGAAGAAGAAAAACTTGCACTGCAAATGATAGAGGAACTGCTTATAGGAAACAGTCCAAACCCTACATTTGAGTGTCAAGAAGATTCACGCCCTAAATCATTTTACCAGTAA | 657 | 43.84 | LFLPLLSVAEMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPVPQTPTGDSEKNKLSPLSPKSLSEILHQKLRKCSKTPSPSMTCLRLDNENSHIGVWQKRAGQSSNSNWVMTVELGKKESEQNISSSSSSSSSDQLPPLEVNPELPREINEEEKLALQMIEELLIGNSPNPTFECQEDSRPKSFYQ | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 16205097 | 16205888 | + | Bpe010733.1 | Bpe13g01056 | 113836 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe13g01056 | 218 | CDD | AP2 | 15 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | Gene3D | AP2/ERF domain | 15 | 74 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | ProSiteProfiles | AP2/ERF domain profile. | 16 | 73 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | Pfam | AP2 domain | 16 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | MobiDBLite | consensus disorder prediction | 149 | 184 | - | - | |
Bpe13g01056 | 218 | PRINTS | Ethylene responsive element binding protein signature | 39 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | PRINTS | Ethylene responsive element binding protein signature | 17 | 28 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | MobiDBLite | consensus disorder prediction | 69 | 89 | - | - | |
Bpe13g01056 | 218 | SMART | rav1_2 | 16 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe13g01056 | 218 | MobiDBLite | consensus disorder prediction | 201 | 218 | - | - | |
Bpe13g01056 | 218 | MobiDBLite | consensus disorder prediction | 198 | 218 | - | - | |
Bpe13g01056 | 218 | PANTHER | AP2-EREBP TRANSCRIPTION FACTOR | 11 | 207 | - | - | |
Bpe13g01056 | 218 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 11 | 207 | - | - | |
Bpe13g01056 | 218 | MobiDBLite | consensus disorder prediction | 149 | 170 | - | - | |
Bpe13g01056 | 218 | SUPERFAMILY | DNA-binding domain | 16 | 74 | IPR016177 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02027 | Bpe13g01056 | CCT | |
Bpe01g00775 | Bpe13g01056 | CCT | |
Bpe02g02027 | Bpe13g01056 | ECH | |
Bpe01g00775 | Bpe13g01056 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00563 | Bpe-Chr2:3632254 | Bpe13g01056 | Bpe-Chr13:16205097 | 1.10E-79 | dispersed | |
Bpe04g00054 | Bpe-Chr4:470637 | Bpe13g01056 | Bpe-Chr13:16205097 | 6.97E-82 | dispersed | |
Bpe06g00683 | Bpe-Chr6:17434406 | Bpe13g01056 | Bpe-Chr13:16205097 | 1.73E-32 | dispersed | |
Bpe09g00436 | Bpe-Chr9:11173869 | Bpe13g01056 | Bpe-Chr13:16205097 | 7.87E-29 | dispersed | |
Bpe13g01056 | Bpe-Chr13:16205097 | Bpe12g00058 | Bpe-Chr12:436846 | 2.56E-22 | dispersed | |
Bpe01g00775 | Bpe-Chr1:7912872 | Bpe13g01056 | Bpe-Chr13:16205097 | 1.88E-85 | transposed | |
Bpe13g01056 | Bpe-Chr13:16205097 | Bpe02g02027 | Bpe-Chr2:21876454 | 1.06E-116 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22344 | PF00847 | AP2 | 8.70E-13 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe13g01056 | - | - | qsu:112002896 | 290.041 |