Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01075 ATGGCGTTTGTGCATTGCTCTTCCTCTCGCTTTTTGGTCTTCTTCTTTCTTTCCCTGCTGCAACTGGGTTGCCGAGTTGTGTCGGAGCCGACTCAGGACAGACAAGCTCTCCTTAGTTTCCTCTCGAGAATTCCTCACGCTATTCGAGTTCGATGGAATTCCTCGGATTCAGCCTGTAATTGGATCGGAGTGGAGTGCGATGCGAATAAGTCATTTGTTTACTCTCTCCGGCTGCCTGGAGTTGGCCTTGTTGGACCCATTCCGGAGAATTCGATTGGATCGTTGAGTCAGCTTCGAGTTCTGAGTCTCCATTCGAATCGTCTCTCCGGCCAGATTCCTTCTGATTTCTCCAATTTGACGTTTCTCAGGAATCTGTATCTACAGAATAATGAACTTTCCGGCGAGTTTCCAACGAGTTTGCTTTCTTTGACTCGTCTGGTTCGACTGGATTTGTCTTCAAACAACTTTTCCGGCTCCATTCCGTCGTCTGTGAACAATCTAACTCGTCTGACCGGACTTTTTCTCCAAAACAATGCCTTCTCCGGTGACTTGTCCGGTGTCGGAGCCGGTAACCTAAACAGCTTCAATGTATCTAATAACAAGCTAAACGGCTCAATTCCTGAGAGTTTGAAGAAATTTCCGGCTTCCTCCTTCGCTGGAAACTTAGGTCTCTGTGGCGGACCTCTATCTTCCTGCAATCCATCCGAATCTCCGGTCGAGAAAAAATTGAAAAGGCTCTCAACGGCAGCCATTATCGGAATAGTAATTGCTTGCGCTTTTGTCTTATTTCTCCTCCTCCTTTGCCTCTTCCTCTGCTTACGCAAGCGCAGCCGACCGCAGCAGGCAAAGTCGCCAAAACCAGCGGTTCAAACCCGCGCCATTGCAGCGGAGGCCGGAACTTCGTCATCCAAGGACGATGTCACCGGAGGATCGATCGACGCAGAGAGAAACAAGCTGGTTTTCTTCGACAGCGGAATTTACAGATTCGATTTGGAGGATCTGTTGAGAGCTTCTGCAGAAGTTTTGGGGAAAGGAAGCGTCGGAACTTCGTACAAAGCAGTGTTGGAAGAAGGAACTACTGTAGTTGTGAAGAGATTGAAGGATGTGGTAGTGACCAAAAAGGAATTTGAATCAACAATGGAGGTCGTGGGGAAGATGAATCACGAAAATGTAGTTTCTCTGAGAGCTTTTTACTATTCCAAGGATGAGAAATTGCTTGTTTCTGATTTCATGGCTTCCGGCAGCTTATCTGCTTCACTTCACGGCAGCAGAGGGTCAGGCCGTACGCCTCTCGACTGGTCTACCCGGTTGAAAATTGCCCTCAGCGCCGCAAGGGGCCTGTCCTACCTCCACCTTTCTGGCAAACTAGTTCATGGCAACCTAAAAGCCTCCAACGTTCTTCTACGACCAGACTACGAGGCTTCACTTTCGGATTTCGGACTCAACCCCCTTTTCGGCACCTCCACCCCACCCAACCGCGTCGCCGGCTACCGCTCGCCGGAAGTTGTGGAAACCAGAAAAGTAACGTTCAAGTCAGACGTGTACAGCTTCGGGGTACTCTTATTAGAACTACTCACTGGAAAGGCGCCTAATCAAGCGTCGTTTGGCGAAGAAGGGATCGATCTGCCGCGATGGGTTCAGTCGGTGGTCCGGGAGGAATGGACGGCGGAGGTTTTTGATGTGGAGCTGATGAGGTATCATAATATAGAAGAAGAGATGGTTCAGCTGTTGCAGATTGCCATGACGTGTGTGGCAATTGTTCCGGATCAGAGGCCGGAGATCGGGGAGGTGGTCCGTCTGATCGAGGAGATTCGGAGGACTGAGACTGATGACGGGTTACGGCTGTCTTCTGATGATCCATCGAAAGGATCGGACGGTCAGAGTTGGACTCCGGAATTGAGGAGCTCACCTATAGGTGTCACGCCGTAG 1929 50.03 MAFVHCSSSRFLVFFFLSLLQLGCRVVSEPTQDRQALLSFLSRIPHAIRVRWNSSDSACNWIGVECDANKSFVYSLRLPGVGLVGPIPENSIGSLSQLRVLSLHSNRLSGQIPSDFSNLTFLRNLYLQNNELSGEFPTSLLSLTRLVRLDLSSNNFSGSIPSSVNNLTRLTGLFLQNNAFSGDLSGVGAGNLNSFNVSNNKLNGSIPESLKKFPASSFAGNLGLCGGPLSSCNPSESPVEKKLKRLSTAAIIGIVIACAFVLFLLLLCLFLCLRKRSRPQQAKSPKPAVQTRAIAAEAGTSSSKDDVTGGSIDAERNKLVFFDSGIYRFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFESTMEVVGKMNHENVVSLRAFYYSKDEKLLVSDFMASGSLSASLHGSRGSGRTPLDWSTRLKIALSAARGLSYLHLSGKLVHGNLKASNVLLRPDYEASLSDFGLNPLFGTSTPPNRVAGYRSPEVVETRKVTFKSDVYSFGVLLLELLTGKAPNQASFGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMTCVAIVPDQRPEIGEVVRLIEEIRRTETDDGLRLSSDDPSKGSDGQSWTPELRSSPIGVTP 642
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16329234 16331676 + Bpe010752.1 Bpe13g01075 113855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01075 642 Gene3D Ribonuclease Inhibitor 189 236 IPR032675 -
Bpe13g01075 642 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Bpe13g01075 642 Gene3D Transferase(Phosphotransferase) domain 1 411 620 - -
Bpe13g01075 642 SUPERFAMILY L domain-like 33 247 - -
Bpe13g01075 642 Pfam Protein tyrosine and serine/threonine kinase 340 599 IPR001245 GO:0004672|GO:0006468
Bpe13g01075 642 MobiDBLite consensus disorder prediction 609 642 - -
Bpe13g01075 642 PANTHER OS05G0588300 PROTEIN 14 622 - -
Bpe13g01075 642 Gene3D Ribonuclease Inhibitor 30 188 IPR032675 -
Bpe13g01075 642 MobiDBLite consensus disorder prediction 620 642 - -
Bpe13g01075 642 ProSiteProfiles Protein kinase domain profile. 336 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe13g01075 642 SUPERFAMILY Protein kinase-like (PK-like) 340 601 IPR011009 -
Bpe13g01075 642 CDD STKc_IRAK 342 604 - -
Bpe13g01075 642 MobiDBLite consensus disorder prediction 282 309 - -
Bpe13g01075 642 PANTHER OS05G0480400 PROTEIN 14 622 - -
Bpe13g01075 642 Gene3D Phosphorylase Kinase; domain 1 305 410 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02022 Bpe13g01075 CCT
Bpe11g01621 Bpe13g01075 CCT
Bpe02g02172 Bpe13g01075 CCT
Bpe02g02172 Bpe13g01075 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00008 Bpe-Chr3:80431 Bpe13g01075 Bpe-Chr13:16329234 8.37E-170 dispersed
Bpe03g01256 Bpe-Chr3:31177856 Bpe13g01075 Bpe-Chr13:16329234 2.63E-152 dispersed
Bpe04g01792 Bpe-Chr4:23413628 Bpe13g01075 Bpe-Chr13:16329234 2.27E-20 dispersed
Bpe12g00365 Bpe-Chr12:8935676 Bpe13g01075 Bpe-Chr13:16329234 0 dispersed
Bpe13g01075 Bpe-Chr13:16329234 Bpe14g00073 Bpe-Chr14:1165811 0 dispersed
Bpe14g00541 Bpe-Chr14:4701524 Bpe13g01075 Bpe-Chr13:16329234 2.05E-104 dispersed
Bpe13g01075 Bpe-Chr13:16329234 Bpe09g00065 Bpe-Chr9:451682 1.58E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63684 PF07714 PK_Tyr_Ser-Thr 1.60E-35 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01075 - - cpap:110818580 907.516