Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01080 ATGGAGTTTCTTATGTTTCCTTTCTTCTTACTCTTCTTCTTAGTAGTATTAAAAATGGTGGTTTTACTTTGGTGGAGACCAAAAAGAATTGAATCCCATTTCTCCAAACAAGAAATTAGAGGACCCCCTTACCGGTTTTTCATCGGAAATGTCAAAGAACTCGTCGGAATGGTGACGAAGGCCTCCGCTAAGCCTATGCCTTTCTCTCACGACATTCTTCCTCGCGTTCTTCCTTTCTATCATCACTGGAGAAAAGTCTATGGCTCCACATTTCTGGTGTGGTTCGGACCCACTTTCCGACTTGTAGTCTCTGATCCAGACTTGATTCGTGAAATCTTAACCTCAAAATTTGAATTTTACGAGAAAAACGAAGCTCATCCACTGATCAAACAGCTCGAAGGCGATGGTTTACTGAGCCTCAATGGTGAAGAATGGGCCCATCATAGAAAACTCATCTCCCCCACTTTCCACATGGACAATCTCAAACTACTGTTGCCGGCGATGGCGAAAAGCGTAGTTGAAATGCTCGATAAGTGGCCGGAAATGGCAGATTCCGGCGAGGTGGAGATTGAAGTTTCCGGGTGGTTCCAAACCCTAACTGAAGATGCCATTACAACATCTGCTTTTGGAAGTAGCTATGAAGATGGAAAAGCCATTTTCAAACTCCAAGCTATGCAAATGGAGATTGCTTCTCAAGCATTGCAGAAGGTTCTCATACCTGGTTATAGGTTTCTACCCACTAGAACAAATTTGAATTTGTGGAAGTTGGACAAGAAGATCAAGAAATTGTTGACCAAGTTGATCGATCATCGGAGAGAAAATTCCGGTCCAAAGGAGAAGGGTTCTAGATTGGATCGAAAGGGTTCGAAGGATTTGTTAGGGTTGATGATCCAAGCTTCAAATTCAAGTCTTTCAGTTTCATCTTCAACCCTCACCGTCAATGACATTGTTCAAGAGTGCAAGAGCTTTCTCTTTGCTGGCAAACAGACAACATCCAATTTGCTGACGTGGACGACTGTTCTATTGGCCATGCATCCACGGTGGCAGAATCTGGCACGTGACGAGGTGATGACTGTGTGTGGAGCACGTGACGTACCCACCAAAGATAATGTTATAAAGCTTAAGACGCTGGGAATGATATTGTCCGAGTCACTTCGATTATATCCGCCAATAGTTGCAACGATCAGACGGGCCAAAATTGACGTTGAGCTTAGAGAGTGTAAAATTCCGAGTGGGACCGAGTTTTTGATTCCGATCATAGCCATTCATCATGATGTAGCAATTTGGGGAAACAAATCCAACATATTCGATCCCAGTAGATTTGCCAATGGTGTGGCACGTGCAGCTAACCATCCGGTTGGGTTCATTCCGTTCGGTCTTGGGGTTCGCACGTGTGTAGGGCAAAACTTGGCTATTTTGCAAGCAAAACTGGCTCTTGCAATCATTCTCCAACGATTTTCATTCAGATTGGGCCCCACCTACCAGCATGCACCAACGGTTGAGATGTTTCTTTACCCACAATATGGGGCACCCATGATTTTCAAGCGACTACCAAATCAAAATGCGGTCCGTCAAGATCAAGGGTCCTGA 1590 44.4 MEFLMFPFFLLFFLVVLKMVVLLWWRPKRIESHFSKQEIRGPPYRFFIGNVKELVGMVTKASAKPMPFSHDILPRVLPFYHHWRKVYGSTFLVWFGPTFRLVVSDPDLIREILTSKFEFYEKNEAHPLIKQLEGDGLLSLNGEEWAHHRKLISPTFHMDNLKLLLPAMAKSVVEMLDKWPEMADSGEVEIEVSGWFQTLTEDAITTSAFGSSYEDGKAIFKLQAMQMEIASQALQKVLIPGYRFLPTRTNLNLWKLDKKIKKLLTKLIDHRRENSGPKEKGSRLDRKGSKDLLGLMIQASNSSLSVSSSTLTVNDIVQECKSFLFAGKQTTSNLLTWTTVLLAMHPRWQNLARDEVMTVCGARDVPTKDNVIKLKTLGMILSESLRLYPPIVATIRRAKIDVELRECKIPSGTEFLIPIIAIHHDVAIWGNKSNIFDPSRFANGVARAANHPVGFIPFGLGVRTCVGQNLAILQAKLALAIILQRFSFRLGPTYQHAPTVEMFLYPQYGAPMIFKRLPNQNAVRQDQGS 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16359134 16361509 - Bpe010757.1 Bpe13g01080 113860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01080 529 PANTHER CYTOCHROMEA2 7 512 - -
Bpe13g01080 529 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 512 - -
Bpe13g01080 529 Gene3D Cytochrome P450 23 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 SUPERFAMILY Cytochrome P450 33 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 Pfam Cytochrome P450 79 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Bpe13g01080 529 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe13g01080 529 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00493 Bpe-Chr1:3141377 Bpe13g01080 Bpe-Chr13:16359134 0 dispersed
Bpe11g00427 Bpe-Chr11:3264321 Bpe13g01080 Bpe-Chr13:16359134 1.43E-115 dispersed
Bpe11g00429 Bpe-Chr11:3271019 Bpe13g01080 Bpe-Chr13:16359134 1.59E-126 dispersed
Bpe13g01080 Bpe-Chr13:16359134 Bpe02g01404 Bpe-Chr2:17539601 5.07E-108 dispersed
Bpe13g01080 Bpe-Chr13:16359134 Bpe02g02041 Bpe-Chr2:21997911 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01080 K15639 - pvy:116109884 740.725