Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01081 ATGGAGACAATTGATCCCAGAACAGGAGAGGTGATAGGAAGAGTGGCCGAAGGAGATAAAGAAGACGTTGATTTGGCCGTCGAGTCTGCGAGACGAGCCTTCGACCATGGCTCCTGGCCTCGTATGCCCCCCTGCGAAAGAGGAAGGATACTCCTAAAGCTAGCAGATTTGATAGAAGAACATGCAGAAGAATTAGCTACTTTAGACACCATTGATGCTGGAAAATTGTTCAAAATGAGCCTGGCAATGGACGTTCCTCAAGTGGCCCAAATTCTCCGTTACTACGCCGGAGCAGCGGATAAAGTTTCCGGTGAGGTGCTCAAAATGTCGAGGGAGTTTCAAGGTTACACTTTGCTAGAGCCTGTCGGAGTGGTCGGCCTCATCATTCCGTGGAATTTTCCGATGCTCTTCTTCTTTGTGAAGGCCAGTCCCGCCCTCGCCGCAGGTTGCACTGTCGTCGTAAAGCCGGCCGAGCAGACTCCTCTCTCCGCTCTATATTGTGCTCATCTTGCAAAACTGGCTGGTGTGCCCGATGGAGTGGTGAATGTTGTAACTGGGTTTGGACCGACGGCCGGAGCTGCAGTCAGCTCTCACATGGACATTGATGCAGTGAGTTTCACCGGATCTACTGAAGTTGGGCGTAAAATAATGGAATCAGCAGCAAAAAGCAACCTAAAGACAGTGACCCTAGAGCTAGGAGGAAAGTCGCCCCTCATTATTTTTGACGATGCTGATGCAGACAAGGCTGCAGAGCTGGCTTTGCTCGGCATTCTTACCAACAAGGGGGAGATTTGTGTTGCTGGGTCTAGAGTACTTGTTCAAGAAGGCATTTATGATCAAGTTGTGGAGAAGCTTGTGGAGAAGGCAAAGAATTGGGTGGTTGATAAAACTCAATTCGCAAAAATACTCTCCTACATTGATCATGGACGAAGAGAAGGAGCCACTTTGTTGACAGGAGGAAAGTCCATTGGCTGCAAGGGTTATTACGTCGAGCCTACAATTTTCGCTGATGTTAAGGATGAGATGGTCATAGCCCAAGAGGAGATATTTGGACCTGTAATGGCCCTTATGAAGTTCAAGACTGTGGAAGAAGCTATAAAAAAGGCAAATGCTACAAAGTATGGTTTAGCAGCTGGGATTGTTACGAACAACATCAACGTAGCGAACACAGTTTCGAGGTCAATCAGGGCCGGATCCATCTGGATTAATTGCTACTTGGCTATGGATGTCGGGTTGGCTTTCGGTGGTTATAAGATGAGTGGATTTGGTAAGGATTATGGAATGGATGGTCTCAAGAAGTTTCTCCAAGTGAAAGCTATTGTCACTCCCATTTACAACTCCCCTTGGCTTTGA 1353 47.6 METIDPRTGEVIGRVAEGDKEDVDLAVESARRAFDHGSWPRMPPCERGRILLKLADLIEEHAEELATLDTIDAGKLFKMSLAMDVPQVAQILRYYAGAADKVSGEVLKMSREFQGYTLLEPVGVVGLIIPWNFPMLFFFVKASPALAAGCTVVVKPAEQTPLSALYCAHLAKLAGVPDGVVNVVTGFGPTAGAAVSSHMDIDAVSFTGSTEVGRKIMESAAKSNLKTVTLELGGKSPLIIFDDADADKAAELALLGILTNKGEICVAGSRVLVQEGIYDQVVEKLVEKAKNWVVDKTQFAKILSYIDHGRREGATLLTGGKSIGCKGYYVEPTIFADVKDEMVIAQEEIFGPVMALMKFKTVEEAIKKANATKYGLAAGIVTNNINVANTVSRSIRAGSIWINCYLAMDVGLAFGGYKMSGFGKDYGMDGLKKFLQVKAIVTPIYNSPWL 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16366936 16370399 - Bpe010759.1 Bpe13g01081 113861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01081 450 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 234 409 IPR016163 GO:0016620
Bpe13g01081 450 SUPERFAMILY ALDH-like 2 446 IPR016161 GO:0016491
Bpe13g01081 450 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 450 - -
Bpe13g01081 450 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 258 269 IPR016160 GO:0016491
Bpe13g01081 450 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER C4-LIKE 2 450 - -
Bpe13g01081 450 Pfam Aldehyde dehydrogenase family 1 440 IPR015590 GO:0016491
Bpe13g01081 450 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 438 IPR016162 GO:0016491
Bpe13g01081 450 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 230 237 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00466 Bpe-Chr8:2996513 Bpe13g01081 Bpe-Chr13:16366936 0 dispersed
Bpe13g00492 Bpe-Chr13:12333457 Bpe13g01081 Bpe-Chr13:16366936 1.22E-174 dispersed
Bpe13g01081 Bpe-Chr13:16366936 Bpe13g01458 Bpe-Chr13:19861523 8.36E-179 dispersed
Bpe13g01081 Bpe-Chr13:16366936 Bpe02g02054 Bpe-Chr2:22097766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01081 K12355 - jre:108997881 687.567