Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01086 ATGCCGGACGTGCAAGCCCTGGTGAATGAGTTCCTTGTAAAGCTTAAGAAACGCGAAGTTATATTGACCCTTGGAAGCTCCAGAACGGTAATTGAATTTCTTTGTGCTGCAAATGAGAAAAAAAGATCTTTCCGAGTTTTTGTTGGAGAGGGTGCTCCAAGGTATAAGGGGCATCTTCTTGCAAAAGAACTATCTTCAAGGGGCTTACAAACTACACTTATAACTGATTCTGCAGTGTTTGCTATGATTTCTCGGGTGAACATGGTTATAGTTGGAGCACATGCCGTCATGACCAATGGTGGCGTAATAGTTCCTGTTGGATTAAATATGCTTGCACTTGCTGCTCAAAGGCACGCTGTTCCCTTTGTTGTACTTGCTGGAAGCCACAAGTGTCCATTGTATCCACATAATCCCGAGGTTCTGCTCAATGAGCTGCGATCCCCATCTGAGCTTCTGGATTTTGGAGAATTTTCAGACTGCATGGATTTTAGAAGTGACACTGGTTCTCCTCTTCTTCATGTGGTCAATCCAACATTTGATTATGTGCCACCAAAACTCGTTAGTTTGTTTATTACAGACACTGGGGGACATAATCCATCGTACATGTACCGGCTCATTGGTGATTACTACTCTGCTAAAGATCTAGTAGTACAACAGTGA 660 43.03 MPDVQALVNEFLVKLKKREVILTLGSSRTVIEFLCAANEKKRSFRVFVGEGAPRYKGHLLAKELSSRGLQTTLITDSAVFAMISRVNMVIVGAHAVMTNGGVIVPVGLNMLALAAQRHAVPFVVLAGSHKCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFRSDTGSPLLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIGDYYSAKDLVVQQ 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16402685 16407021 - Bpe010764.1 Bpe13g01086 113866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01086 219 SUPERFAMILY NagB/RpiA/CoA transferase-like 14 214 IPR037171 -
Bpe13g01086 219 Pfam Initiation factor 2 subunit family 14 199 IPR000649 GO:0044237
Bpe13g01086 219 PANTHER BNAA01G32370D PROTEIN 14 217 - -
Bpe13g01086 219 Gene3D - 4 209 IPR042529 -
Bpe13g01086 219 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 14 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00817 Bpe-Chr6:18325430 Bpe13g01086 Bpe-Chr13:16402685 7.72E-20 dispersed
Bpe08g00552 Bpe-Chr8:3846077 Bpe13g01086 Bpe-Chr13:16402685 3.64E-14 dispersed
Bpe13g01086 Bpe-Chr13:16402685 Bpe02g02059 Bpe-Chr2:22128656 5.42E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01086 K03754 - mnt:21406699 372.474