Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01099 ATGGACATATCCTTTCTAGTAGAGAACGAAACACCATTCTTCCATTTTCCTCAATATACAGCTGCTCCCATAGACAACACTTTGGAAGATTACAATCTCTACTGGGAAACAAACACTCTCTTCCAAGCACAAGATATCGACGACAGTTGGGGAGTAGACGACTTGCTGAATCAGTACTACGACACTAGCTCGTCGGACGGAGCAGCTTTATCGCCGGTGGAAGCCTCCAAGAACATTGTCTCAGAGAGGAACAGGAGGAAGAAGCTCAACGACAGGCTCCTAGCACTTAGAGTAGTAGTTCCAAATATCACAAAGATGGATAAGGCTTCCATCATTAGAGATGCAATAAAGTACATAGAAGAACTGCACGAGGAAGAGAAGAAAATACAGGCGGAGATTATGGAGCTGGAGAATGGGAGAATCGACAAGAGCGCTTCATTTGACGCCATTGATGATCATCTGGCTGCTCTAGTTTTCTCCAGATCAGAGAGGAAGAAGAACAACAACAGTCCACAGATTCTGAATTCTGACGAAGAAATGAGTTTCCCCATTGAAGTTGTTGAGTTGAGCTTGACAAGCCTTGGAGAGAAGACGGTGGTAGTGAAGGTGAGATGCAGGAAAAAGAGGAGAACAGTAGTGAATATTTGCAGGGTTTTCGAATCACTGAAGCTCAAAATGATGACATCTAATATTACCTCTGTTTCAGACACCCTTTTGAAGACAGTCTTCGTGGAGGCAAAAAAAGAAGAGATTAATAATTTGAAGATGAAAATAGAAGCTGCAATTGCGTCCCACAACAATCATTCACAAAGTTCTTGA 819 42.61 MDISFLVENETPFFHFPQYTAAPIDNTLEDYNLYWETNTLFQAQDIDDSWGVDDLLNQYYDTSSSDGAALSPVEASKNIVSERNRRKKLNDRLLALRVVVPNITKMDKASIIRDAIKYIEELHEEEKKIQAEIMELENGRIDKSASFDAIDDHLAALVFSRSERKKNNNSPQILNSDEEMSFPIEVVELSLTSLGEKTVVVKVRCRKKRRTVVNICRVFESLKLKMMTSNITSVSDTLLKTVFVEAKKEEINNLKMKIEAAIASHNNHSQSS 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16569000 16570864 - Bpe010777.1 Bpe13g01099 113879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01099 272 Coils Coil 244 264 - -
Bpe13g01099 272 PANTHER TRANSCRIPTION FACTOR BHLH35 30 267 - -
Bpe13g01099 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 137 IPR036638 GO:0046983
Bpe13g01099 272 SMART finulus 79 128 IPR011598 GO:0046983
Bpe13g01099 272 Gene3D - 72 139 IPR036638 GO:0046983
Bpe13g01099 272 Pfam Helix-loop-helix DNA-binding domain 80 122 IPR011598 GO:0046983
Bpe13g01099 272 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 30 267 - -
Bpe13g01099 272 Coils Coil 112 139 - -
Bpe13g01099 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 122 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02065 Bpe13g01099 CCT
Bpe01g00707 Bpe13g01099 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00180 Bpe-Chr8:994639 Bpe13g01099 Bpe-Chr13:16569000 2.18E-15 dispersed
Bpe08g01301 Bpe-Chr8:14326376 Bpe13g01099 Bpe-Chr13:16569000 2.01E-17 dispersed
Bpe11g00830 Bpe-Chr11:6188792 Bpe13g01099 Bpe-Chr13:16569000 8.45E-20 dispersed
Bpe13g01099 Bpe-Chr13:16569000 Bpe15g00806 Bpe-Chr15:18248485 2.13E-19 dispersed
Bpe01g00707 Bpe-Chr1:5334000 Bpe13g01099 Bpe-Chr13:16569000 6.01E-74 transposed
Bpe04g00339 Bpe-Chr4:2149599 Bpe13g01099 Bpe-Chr13:16569000 1.50E-19 transposed
Bpe13g01099 Bpe-Chr13:16569000 Bpe02g02065 Bpe-Chr2:22176952 7.90E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22349 PF00010 HLH 2.20E-10 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01099 - - gmx:100817978 234.187