Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01110 ATGGCGAACGAAAAAGCCATTAGCCTCGAGGAGATCAAGAACGAGACCGTTGATCTGGAGAAAATTCCCATTGATGAGGTGTTTCAGCAGTTGAAATGCACCCGAGAAGGATTATCGTCCCAGGAGGGAGAAAACCGGCTTCAAATTTTTGGTCCAAACAAGTTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAATTTTTAGGATTCATGTGGAATCCTCTTTCATGGGTGATGGGGGCTGCTGCTATAATGGCAATTGCCTTAGCTAATGGCGGGGGAAAGCCTCCAGATTGGCAGGATTTTCTTGGAATTATCTGTCTGTTGGTTATCAACTCCACCATTAGTTTCATCGAAGAAAATAATGCTGGCAATGCAGCAGCTGCTCTGATGGCTGGTCTTGCTCCTAAAACTAAGGTTCTTAGAGATGGAAAATGGAGCGAACAAGATGCTGCAATTTTGGTACCAGGAGATGTCATTAGTGTTAAGTTGGGGGATATCATCCCGGCCGATGCCCGTCTTCTTGAGGGCGATCCATTGAAAATTGACCAATCTGCTCTCACTGGAGAATCACTCCCAGTGACAAAACATCCCGGGGATGAAGTTTTCTCTGGTTCGACATGCAAGCAAGGAGAGATTGAAGCTGTTGTTATTGCCACTGGTGTTCATACATTCTTTGGCAAGGCTGCTCATCTTGTGGATAGCACCAACCAAGTTGGTCACTTTCAGAAGGTTCTCACCTCGATTGGGAACTTTTGTATATGTTCTATAGCAGTCGGAATGTTGATAGAACTTATAGTAATGTACCCGATTCAGCATCGTGCGTATCGTGATGGAATTGACAATCTTCTCGTTCTTTTGATTGGAGGAATTCCAATTGCCATGCCTACTGTTTTATCCGTGACCATGGCAATTGGGTCACACAAGCTATCTCAGCAGGGTGCAATCACCAAGCGAATGACTGCAATAGAAGAAATGGCTGGCATGGATGTTCTTTGCAGTGACAAAACTGGGACACTTACTCTTAACAAGCTTAGCGTTGATAGGAGTTTAATTGAGGTATTTGGCAAAGATGTCGATAAAGAGCACATAATTTTACTGGCAGCAAGGGCATCAAGGACAGAAAACCAAGATGCCATTGATGCCGTCTTCGTTGGAATGCTAGCAGATCCAAAAGAGGCTCGAGCTGGTATAACAGAAGTGCACTTCTTACCCTTCAATCCTGTTGATAAAAGAACTGCATTGACATATATTGATTCGAATGGAAATTGGCATCGAGCCAGTAAGGGTGCTCCAGAGCAGATTTTAGCTCTTTGCAACTGCAAGGAAGACGTTAAGAAGAAAGTTCATAATATCATTGACAAATTTGCAGAACGTGGCCTCCGGTCATTAGCTGTAGCTAGACAGGTAGTTCCCGAGAAAACTAAGGAAAGTCCAGGTGGTCCTTGGGAATTTGTTGGTTTATTGCCTCTCTTTGATCCGCCAAGACATGACAGTGCTGAGACAATACGAAGAGCTCTCCATCTTGGTGTGAATGTCAAGATGATTACTGGTGACCAACTTGCCATAGCTAAGGAAACTGGCCGCAGACTTGGAATGGGAACAAACATGTATCCTAGCGCTTCCTTACTTGGCCAACACAAGGATGAAAGCATTGCCGGCCTTCCCGTTGAAGAGCTTATAGAGAAAGCAGATGGCTTTGCTGGAGTTTTCCCAGAGCACAAATATGAAATTGTGAAGAAGTTGCAAGAGCGAAAACACATATGTGGAATGACCGGTGATGGAGTGAATGATGCCCCTGCTTTGAAAAAAGCAGATATTGGAATTGCTGTTGCTGATGCTACCGATGCTGCAAGAAGTGCTTCAGATATTGTTCTCACTGAACCCGGTCTTAGTGTCATCATTAGTGCAGTCCTTACAAGCCGAGCTATTTTTCAAAGAATGAAGAATTATACGATTTATGCAGTCTCCATTACAATCCGTATTGTTTTTGGTTTCATGTTCATTGCTCTCATATGGAAATTTGATTTCTCCCCATTCATGGTTTTAATTATTGCCATTCTGAACGACGGTACGATAATGACAATCTCGAAGGATAGAGTGAAACCATCTCCACTCCCAGATAGCTGGAAATTGAAAGAAATATTTGCCACCGGCGTTGTGCTTGGAGGTTACTTGGCATTAATGACCGTCATTTTCTTTTGGTTAATGAAAGACACTGATTTCTTCTCGAACAAGTTTGGCGTGAGATCACTTAGGGATAGCCCCGAAGAGATGATGGCAGCTTTATATCTTCAAGTTAGCATAGTTAGCCAGGCCCTCATTTTTGTGACTCGTTCTCGTAGCTGGTCATATGTCGAACGCCCCGGTTTGCTTTTACTGACGGCTTTTTTGATTGCGCAACTGGTTGCCACTGTCATAGCTGTTTATGCTAACTGGAAGTTCGCAAAAATTAAAGGAGCTGGATGGGGTTGGGCCGGTGTCATCTGGCTTTACAGTATCGTCTTCTACATTCCACTTGACTTGATGAAATTTGCTATTCGTTACATCTTAAGTGGGAAGGCATGGGTTAACATGCTTGAAAACAAGACTGCATTTACCACCAAGAAAGACTATGGAAAAGAGGAGAGAGAGGCTCAATGGGCTCTTGCCCAAAGAACCCTCCATGGCCTTCAACCGCCACAAAAAGCTGATCTTTTCCCAGAAAAGAGCAGCTACCGAGAACTTTCTGAGATCGCTGAGCAAGCCAAGAGAAGAGCCGAGATTGCTAGGCTTCGAGAGCTCAACACGCTCAAAGGCCATGTCGAGTCAGTGGTGAAGCTCAAAGGGCTAGACATCGACACAATTCAGCAGCATTACACAGTATGA 2865 44.01 MANEKAISLEEIKNETVDLEKIPIDEVFQQLKCTREGLSSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMGAAAIMAIALANGGGKPPDWQDFLGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIGNFCICSIAVGMLIELIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRSLIEVFGKDVDKEHIILLAARASRTENQDAIDAVFVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQILALCNCKEDVKKKVHNIIDKFAERGLRSLAVARQVVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMKDTDFFSNKFGVRSLRDSPEEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLLTAFLIAQLVATVIAVYANWKFAKIKGAGWGWAGVIWLYSIVFYIPLDLMKFAIRYILSGKAWVNMLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPQKADLFPEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 954
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16704900 16712657 - Bpe010788.1 Bpe13g01110 113890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01110 954 Gene3D - 903 954 - -
Bpe13g01110 954 Pfam E1-E2 ATPase 134 311 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Bpe13g01110 954 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Bpe13g01110 954 SFLD Haloacid Dehalogenase 314 642 - -
Bpe13g01110 954 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Bpe13g01110 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Bpe13g01110 954 PRINTS H+-transporting ATPase (proton pump) signature 763 784 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 PANTHER CALCIUM-TRANSPORTING ATPASE 4 934 - -
Bpe13g01110 954 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Bpe13g01110 954 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 809 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bpe13g01110 954 SFLD p-type atpase 314 642 IPR044492 -
Bpe13g01110 954 PANTHER PLASMA MEMBRANE ATPASE 4 934 - -
Bpe13g01110 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 850 IPR023298 -
Bpe13g01110 954 Gene3D - 97 818 - -
Bpe13g01110 954 Gene3D - 344 491 IPR023299 GO:0000166
Bpe13g01110 954 Gene3D - 329 628 IPR023214 -
Bpe13g01110 954 Gene3D - 135 219 - -
Bpe13g01110 954 SUPERFAMILY HAD-like 328 638 IPR036412 -
Bpe13g01110 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 566 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 351 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe13g01110 954 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Bpe13g01110 954 Coils Coil 905 925 - -
Bpe13g01110 954 CDD P-type_ATPase_H 37 844 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bpe13g01110 954 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00697 Bpe-Chr1:5164534 Bpe13g01110 Bpe-Chr13:16704900 0 dispersed
Bpe02g00602 Bpe-Chr2:3917035 Bpe13g01110 Bpe-Chr13:16704900 0 dispersed
Bpe04g00028 Bpe-Chr4:243364 Bpe13g01110 Bpe-Chr13:16704900 8.88E-46 dispersed
Bpe08g00700 Bpe-Chr8:8195142 Bpe13g01110 Bpe-Chr13:16704900 0 dispersed
Bpe08g01488 Bpe-Chr8:15588049 Bpe13g01110 Bpe-Chr13:16704900 2.25E-28 dispersed
Bpe13g00272 Bpe-Chr13:10650936 Bpe13g01110 Bpe-Chr13:16704900 0 dispersed
Bpe13g01110 Bpe-Chr13:16704900 Bpe14g00543 Bpe-Chr14:4721772 0 dispersed
Bpe13g01110 Bpe-Chr13:16704900 Bpe02g02077 Bpe-Chr2:22280771 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01110 K01535 - tcc:18589272 1693.32