Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01112 GGAGAAAGGAAGAACATTAATTCAGAATTGTGGCATGCTTGCGCTGGACCTCTAGTTTCTCTACCTCCAGTTGGGAGCCTTGTGGTTTACTTTCCTCAAGGCCACAGTGAGCAGGTTGCAGCATCGATCCATAAGGAGACTGATTTTGTGCCCAACTATCCAAACCTTCCTTCCAACTTGATTTGTATGCTTCGTAACATCACTTTACATGCTGATCTTGAAACTGATGAAGTTTATGCACAAATGACCCTTCAGCCTGTATCCAAATATGACAAGGAAGCTTTACTGGCATCTGATATAGGGCTCAAGCAAAGCCGGCAACCTTCTGAGTTCTTCTGCAAAACTCTTACTGCTAGTGACACTAGCACCCATGGTGGCTTTTCCGTTCCTCGTCGGGCTGCCGAGAAGATATTTCCACAACTAGATTATACCATGCAACCCCCTGCTCAAGAGCTAGTTGCTAGAGATCTGCATGATACTTCTTGGGCTTTCAGACATATTTATCGCGGCCAACCGAAAAGACATCTGCTGACCACCGGCTGGAGTGTTTTTGTTAGTACAAAACGTCTTTTTGCTGGAGATTCGGTTCTTTTCATACGGGATGAAAAATCACAGCTACTTTTAGGCATACGACGGGCTAATAAGCAGCAGCCAGCACTTTCTTCGTCTGTAATTTCTAGTGACAGCATGCACATTGGAATTCTTGCTTCTGCAGCTCATGCAGCCGCAAATAACAGTCCATTTACTATATTTTATAATCCTAGGGCTAGTCCTTCAGAATTTGTAATTCCATTGGCCAAATATAATAAAGCAATGTACACCCAAGTTTCCCTTGGCATGCGATTTCGAATGATGTTCGAGACCGAGGAGTTAGGAGTACGCAGATACATGGGTACTATCACCGGTATCAGTGACTTGGATTCAGTTCGATGGAAAAGTTCCCAATGGCGTAATCTTCAGGTTGGATGGGATGAGTCGGCAACAGGTGCAAGGCCGACCCGGGTTTCGATATGGGAAGTTGAGCCCGTTATAACGCCTTTCTACATATGCCCGCCTCCATTTTTTCGACCCAAATTACCCAAACAACCTGGAATGGCAGATGATGAATCTGAAATCGAGAATGCTTTCAAGAGAGCCATGCCGTGGCTTGGGGATGACTTTAGCGTGAAGGACAGCCAGAGTCCAATTTTTCCCGGTCTAAGTTTGGTGCAGTGGATGAGCATGCAGCAAAGTAATCAATTTCCTGCTCAATCCGGGTTTTTACCGTCTATGCTCTCTCCAAATGCCCATTCGCTGCATAACAGTTTAAGCACTGATGATCCATCTAAATTATTGAGTTTTCAAACTCCAGTGCTATCTTCGCCTACTCCATATAACAAACCTAATCAGCAGGGCCAAGTTATTCAGTTGCAGCAGCCAGCCTCTGCCTGGCCACAACAACAACCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGCCGCAGTCTCAGCCACAACAATTACTGCAGATTCCCACCAGCCAACAGCTACAACGGCAGCAACCTCAGCAATTAGCACATATTCAACCACAACACCAGCAAAACAAGCAAGTTCTGCCACAACAACAGCTGACCCAACAATCTCCTTCAAATAATGGTGTTCTTATTGGTAACCAGATCCAAAATCAAACTTTGCAGCAGCCATTGTTGTACTCCCAGCTTCAACTACAGCAGTTGATGTCCGGCAATGGCCAAACCCAGCAGCACAGTATGAATAAATCATTTCAGATGACATCTTTACCACAAGATTCCTTTTTTCAGCAACAAATGGATCAGCAAACGAGTCTCGCTCCTCGGCATCAGCAGCCAGCACAGTTACAACAGTCGCAACTTCAGCTTTCTGTGAAAGCTCAACAGAACCAACCAGTCCAACAATTGGCTCAACAGATGACATCAGACCAGCAACTTCAGCTTCAGCTGTTACAGAAATTACAGCAGCAGCAGCAGCAGCAGCCGCAGCCGCAGCAGGTGCTCTTTCCTGCAAACCCATTATTACAGTCTCAGGCAGTTCAGCTACAGCAGGGCCAGGGTCAGGGCCATCAGCAAAACCAGTATTCATCACAGCTGCCACTGTCTCATCTTCAGCTACAACAAAACACCAATGGCTTTTCAACTTCAGGCCATCTCCAGTCTCAACAGGCTCCTATAAACCAGCCCCAACCCCAGCCCAAGGGCCAATTCAAGCCACTCAGTACGATGAGAGCTCAGTCTATGACAGATGGTGATGCTCCATCTTGTTCAACTTCACCTTCCTCCAATTATTGCCATGTTCCAGCTTCAAACCTTTTGAACAGAAGGCAGGGACCAGTCACTCAAGCTGAATGTTCAGTAGTCGAGCTTTCGAACAACTCACTTCAGGAACTTCAAAGTAAATACGATTCCCGAATCAAACATGAGTTTCCGGGCGAAAAAGGATCTGATCCGATTAAATTTAAAAGCACAGTCAGTGATCAGTTAGAAGCATCCTCTTCCGGGACGTCATATTGTCTAGATGCCGGGACCATACGGCAGCCGTTCTCCCTCCCAGTTTGTTTAGACAACGATGTCCAATCCAATCACCGGATGAACATTCCTTTCACGAGTAACATCGACGGCTTGATGCCAGATACTTTGCTATCGAGAGATTACGACTCCCAAAATTTACTTTCTAATTACAGCAGTATTCCGAGAGATATCGAAACGGAGCTGTCGAGAGCTCCTATCAGTCCACATCCATTTGGGGTGCCAAACTTGCCTCTTAAGCCCGGTTGCTCAAATGACGTCCCCATAAACGATTCTGGAGCCATGGGTGGCGGACTGTGGGCAAATCACAATCAACCGACGCGGAGTTATACGAAGGTTCAAAAACGCGGATCTGTAGGGAGATGTATCGACGTGACTCGATATAGAGGATATGGAGAGCTAAGGTTTGATCTTGCTCGCATGTTCGGGATTGAAGGGCAGCTTGAAGATCCTCAGAGAACTGATTGGAAGCTCGTTTATGTAGATCATGAAAGCGACATACTTCTTGTCGGGGATGATCCATGGGAAGAGTTCGTAAGCTGTGTTCAGAGCATAAAGATCCTTTCATCGGCCGAAGTACAGCAAATGAGCTTGGACGGAGATTTGGGCCAAATTCAAATTCCAAATCACACATGTAGCGGGACAGACAGTGAAAATGCGTGGAGAGACGACCATTCTGCAGCCTCCTTCAATCGA 3267 47.02 GERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASIHKETDFVPNYPNLPSNLICMLRNITLHADLETDEVYAQMTLQPVSKYDKEALLASDIGLKQSRQPSEFFCKTLTASDTSTHGGFSVPRRAAEKIFPQLDYTMQPPAQELVARDLHDTSWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANKQQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEELGVRRYMGTITGISDLDSVRWKSSQWRNLQVGWDESATGARPTRVSIWEVEPVITPFYICPPPFFRPKLPKQPGMADDESEIENAFKRAMPWLGDDFSVKDSQSPIFPGLSLVQWMSMQQSNQFPAQSGFLPSMLSPNAHSLHNSLSTDDPSKLLSFQTPVLSSPTPYNKPNQQGQVIQLQQPASAWPQQQPQPQPQPQPQPQPQPQPQPQPQPQSQPQQLLQIPTSQQLQRQQPQQLAHIQPQHQQNKQVLPQQQLTQQSPSNNGVLIGNQIQNQTLQQPLLYSQLQLQQLMSGNGQTQQHSMNKSFQMTSLPQDSFFQQQMDQQTSLAPRHQQPAQLQQSQLQLSVKAQQNQPVQQLAQQMTSDQQLQLQLLQKLQQQQQQQPQPQQVLFPANPLLQSQAVQLQQGQGQGHQQNQYSSQLPLSHLQLQQNTNGFSTSGHLQSQQAPINQPQPQPKGQFKPLSTMRAQSMTDGDAPSCSTSPSSNYCHVPASNLLNRRQGPVTQAECSVVELSNNSLQELQSKYDSRIKHEFPGEKGSDPIKFKSTVSDQLEASSSGTSYCLDAGTIRQPFSLPVCLDNDVQSNHRMNIPFTSNIDGLMPDTLLSRDYDSQNLLSNYSSIPRDIETELSRAPISPHPFGVPNLPLKPGCSNDVPINDSGAMGGGLWANHNQPTRSYTKVQKRGSVGRCIDVTRYRGYGELRFDLARMFGIEGQLEDPQRTDWKLVYVDHESDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGQIQIPNHTCSGTDSENAWRDDHSAASFNR 1089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16729661 16737101 - Bpe025268 Bpe13g01112 113892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 611 632 - -
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 1070 1089 - -
Bpe13g01112 1089 Pfam AUX/IAA family 966 1051 IPR033389 -
Bpe13g01112 1089 SUPERFAMILY DNA-binding pseudobarrel domain 102 241 IPR015300 -
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 722 772 - -
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 506 547 - -
Bpe13g01112 1089 Gene3D - 275 345 - -
Bpe13g01112 1089 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 1079 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe13g01112 1089 PANTHER AUXIN RESPONSE FACTOR 19 2 1079 - -
Bpe13g01112 1089 SMART B3_2 112 214 IPR003340 GO:0003677
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 446 478 - -
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 446 547 - -
Bpe13g01112 1089 CDD B3_DNA 111 212 IPR003340 GO:0003677
Bpe13g01112 1089 Pfam Auxin response factor 238 320 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe13g01112 1089 Pfam B3 DNA binding domain 112 213 IPR003340 GO:0003677
Bpe13g01112 1089 ProSiteProfiles B3 DNA-binding domain profile. 112 214 IPR003340 GO:0003677
Bpe13g01112 1089 SUPERFAMILY CAD & PB1 domains 962 1043 - -
Bpe13g01112 1089 Gene3D - 961 1054 - -
Bpe13g01112 1089 MobiDBLite consensus disorder prediction 479 505 - -
Bpe13g01112 1089 Gene3D - 110 213 IPR015300 -
Bpe13g01112 1089 ProSiteProfiles PB1 domain profile. 965 1058 IPR000270 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01233 Bpe-Chr11:9210760 Bpe13g01112 Bpe-Chr13:16729661 5.25E-29 dispersed
Bpe13g01112 Bpe-Chr13:16729661 Bpe08g00146 Bpe-Chr8:773862 8.34E-20 dispersed
Bpe08g00725 Bpe-Chr8:8707143 Bpe13g01112 Bpe-Chr13:16729661 7.24E-58 transposed
Bpe13g01112 Bpe-Chr13:16729661 Bpe02g02169 Bpe-Chr2:22976543 1.82E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22352 PF02362 B3 2.60E-19 CL0405 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01112 K14486 - gmx:100805456 1202.58