Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01126 ATGGGTTTCAAAGATTTTGACCAGATATCAGAACGACGACAAGCGGAGAGGGAACGTAAGTTCAGGAAAAAGGTTACCATCGGTGCCATTTCAGGCGGTTTGCTCCTAGTTTTCGTCGTCGCCGCAGTCATCTCCTTAGTCTCAGACCACAGCAATGGAAACACCAAATCACCTGAAACTCCATCCACCAAACAAGTTTCGCATGTCGACAGAGTCGTCAAAGTTCTCTGCAATAGCACTGATTACAAGGACAAATGCGAAACAACTCTAGAAAAGGGGATAGAAACTAACCCCAATTTGTCTCAACCAGCGGATCTTCTCAAAACAGCTATTGCCGCCGCGGCTGGCGAAATCCAGAAGGCCTTGGATCAAACAAAAACCTTCAAATTCAGCAACCCAGAAGAGAAAGCGGCGTTCGAAGACTGTAAAGAGCTAATTCAAGATGCAATCAACGAATTAGAGGAATCTGTATCGCAAATCAGCAGCGGGAAGAGCTCAGGCAAATTATCCCTAAACACGCCAGACTTGAACAATTGGCTCAGTGCTGTAATGTCGTACCAACAGACCTGCATCGATGGATTTCCGGAGGGCAAAACGAAGGAGAAGATGGAGAAGGCTCTAGTGGCCGGAAAACAGTTGACGAGCAATTCCCTGGCCATGATATCGGAGGTCACTTCCTTTCTTTCGGCATTCCAAGTACCAGGACTTAGCCGCCGCCTAATGGCAGACAGAAGCGATAGCTCGCCGTCGTTGGACGCGGATGGGGTGCCTACCTGGGTGAACCAAGACGATCGGAGAATCTTAAGCGGCGCCAATGTTGTCAAGCCAACACCGAACGTGACGGTGGCGAAAGACGGCAGCGGAGACTTCAAAACCATTTCTGAGGCGTTAGCCGCCATACCTGCCGTATACCAAGGAAGGTATAGTGTCTACGTTAAAGAAGGAATATACGATGAAACTGTAATGGTAACAAAGAAGATGGTAAACATCACTATGTATGGCGATGGTTCACGAAAGACCATCGTCACCGGGAGCAAAAATTTTGTCGACGGAGTTAGAACGTTCCAAACCGCATCTTTTGCTGCACTAGGAGATGGTTTTATGGCAAAAGACATGGCATTTAGAAACACTGCAGGCCCACAAAAGCACCAGGCAGTGGCAATAAGAGTCCAAGCAGATAGGGCGATTTTCCTCAACTGTCGTTTTGAGGGGTATCAAGACACCTTATATGCACAGACACATCGACAATTTTATCGAGGTTGTGTCATAGCCGGGACCGTCGATTTCATATTTGGCGATGCTGCTGTCGTCTTTCAAAACTGCATGATCGTCGTCAGAAAACCTCTGGACAATCAACAAAACATAATCACAGCTCAAGGTAGGATAGACAAACATGAAACAACAGGTATAGTGCTGCAAAACTGTCGCATATTGGCCGATAAGAAGCTAAAACCGGTGATTTCTACGATCAAGAGCTACCTTGGGAGACCATGGAAAGAGTATTCGAGAACTATCGTTATGGAATCGACAATTCCTGACTTCATTCACCCCGATGGGTGGCTTCCGTGGGAAGGTGATTTTGCGTTGAAGACTTTATATTACGCAGAGTACAACAACAAAGGGCCGGGCTCGAGCATTAGTGCAAGGGTCAAGTGGCCAGGTTACAAGATCATAAACAAGCAAGAGGCAGCCACGTATACTGTAAAGGCTTTCCTGCAGGGCAATTGGATCGACTCGACTGCCAACCAGGCGATTCCTATTCACCTCGGCTTATACAGTTAA 1782 47.14 MGFKDFDQISERRQAERERKFRKKVTIGAISGGLLLVFVVAAVISLVSDHSNGNTKSPETPSTKQVSHVDRVVKVLCNSTDYKDKCETTLEKGIETNPNLSQPADLLKTAIAAAAGEIQKALDQTKTFKFSNPEEKAAFEDCKELIQDAINELEESVSQISSGKSSGKLSLNTPDLNNWLSAVMSYQQTCIDGFPEGKTKEKMEKALVAGKQLTSNSLAMISEVTSFLSAFQVPGLSRRLMADRSDSSPSLDADGVPTWVNQDDRRILSGANVVKPTPNVTVAKDGSGDFKTISEALAAIPAVYQGRYSVYVKEGIYDETVMVTKKMVNITMYGDGSRKTIVTGSKNFVDGVRTFQTASFAALGDGFMAKDMAFRNTAGPQKHQAVAIRVQADRAIFLNCRFEGYQDTLYAQTHRQFYRGCVIAGTVDFIFGDAAVVFQNCMIVVRKPLDNQQNIITAQGRIDKHETTGIVLQNCRILADKKLKPVISTIKSYLGRPWKEYSRTIVMESTIPDFIHPDGWLPWEGDFALKTLYYAEYNNKGPGSSISARVKWPGYKIINKQEAATYTVKAFLQGNWIDSTANQAIPIHLGLYS 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16828866 16831233 - Bpe010803.1 Bpe13g01126 113906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01126 593 PANTHER PECTINESTERASE 15 590 - -
Bpe13g01126 593 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Bpe13g01126 593 SMART PMEI_2 68 220 IPR006501 GO:0004857
Bpe13g01126 593 TIGRFAM PME_inhib: pectinesterase inhibitor domain 61 223 IPR006501 GO:0004857
Bpe13g01126 593 SUPERFAMILY Pectin lyase-like 276 578 IPR011050 -
Bpe13g01126 593 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 15 590 - -
Bpe13g01126 593 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 224 IPR035513 -
Bpe13g01126 593 CDD PMEI-like_3 76 226 - -
Bpe13g01126 593 Pfam Plant invertase/pectin methylesterase inhibitor 73 220 IPR006501 GO:0004857
Bpe13g01126 593 Gene3D - 277 592 IPR012334 -
Bpe13g01126 593 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 224 IPR035513 -
Bpe13g01126 593 Pfam Pectinesterase 279 575 IPR000070 GO:0030599|GO:0042545
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02161 Bpe13g01126 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00049 Bpe-Chr9:328544 Bpe13g01126 Bpe-Chr13:16828866 7.07E-98 dispersed
Bpe13g01126 Bpe-Chr13:16828866 Bpe14g00892 Bpe-Chr14:6662463 1.43E-130 dispersed
Bpe02g01953 Bpe-Chr2:21448302 Bpe13g01126 Bpe-Chr13:16828866 0 transposed
Bpe05g00209 Bpe-Chr5:13344035 Bpe13g01126 Bpe-Chr13:16828866 5.82E-177 transposed
Bpe05g00827 Bpe-Chr5:21532637 Bpe13g01126 Bpe-Chr13:16828866 8.05E-174 transposed
Bpe13g01298 Bpe-Chr13:18131672 Bpe13g01126 Bpe-Chr13:16828866 0 transposed
Bpe15g00401 Bpe-Chr15:15519019 Bpe13g01126 Bpe-Chr13:16828866 9.34E-92 transposed
Bpe13g01126 Bpe-Chr13:16828866 Bpe02g02161 Bpe-Chr2:22894363 2.77E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01126 - - jre:108993565 822.002