Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01134 TTTGGGTTTAACATGACATTGGAGGACACAGCGAATAGATTTGTCGGTGATAATGATCGGTTTCCGGTTGGTCTGCGGGTCCTTGCGGTAGACGACGACGCTTCTTGTCTGAAATTGGTAGAGAATCTTCTTCGAAAGTGCCAGTATAATGTAACAACTACCAATCAGCCAATGGAGGCATTGAAAATGTTGAGGGGAAGTAAAGACCAGTTTGACATTGTAATCACTGATGTAAACATGCCCGGAATGGATGGTTATAAGCTTCTCGAGCTGATCGGGCTCGAGATGGATCTCCCCGTCATAATGTTGTCGGCTCATAGCGATACGGAGTTTGTAATGAAGGGAATCTACCATGGGGCTTGTGATTATCTCGTGAAACCGTGTCGAATGGCCGAGATTAAGAACATATGGCAACATGTTGTCCGGAAAAAGCGTATGGATCGAAAGGGCAAGAATGATAATTCAAATCCAGATGAACGAGGATTCGTATTGGCCAAAAATTCCGATAATTTGAAAGTGGGTCGAAAGCGAAAGGAACAAATTGAAGGCGGCGAAGACGAGGAGGATGAAAGCGAAAATGAAGATCCTTCGACTCAAAAGAAGCCTAGAGTGGTTTGGTCTGTAGAGCTGCACAGGAAGTTTGTTGCAGCTGTTACTCAATTGACTCTTAAAAAAGCCGTTCCGAAGAAGATTCTTGATCTGATGAACGTGGAAGGACTCACACGAGAAAATGTGGCGAATTACTTGTTTTGCTCATTTGGTCATCTAATGTTGCAGAAATATAGGCTCTACCTGAAAAGAATTAGTACGGCAGGAATCCAACAGGAAAATCCGATGCATATAAGTATGATTGAGGGATTTGAATTGTCGGGATCTCAAATATTTTCGAGCAATGCGCTCTCATCGTATCCGATGGTTGAAGTTCTTGGTGAACAATCTCCTTCAGGATTGAACTTGCGGGGGATTGTTTCGCGTAAATTAATCCGACACAGCACTTCTCGTGACTTAAACAATTCTTTGGATTCGTTCATAAAATTCCCTCAAAGCCAATCTCCTGACTTATTTAACGAAATTCCGACATCGTTAGACCTCACTGACTTGCATCAAGGAAAGTCGTTATATAGAGAGTTTAATCCGATCAGCACTACCCCTGACTTCTCTTATGCCCCGAACTTTCCGGACAATAAAGTGGCTTTGAATAGCTCAAATGATTCTATATGGAGATTCCCGGCCAATTGTATGATTTTAGATGGAAAAAATCATGGAGCCATAACCCCGCTGAAATCGGAATCTTTCAAAATCGACGGAAATGTCGCTTTGAATCTTTTGGGTCATGATCAAAGTAATGGAAATTGGCAGCAAGGTGTTCATTTATCTAAATTTCCACCGACTGGCTTGGGATCGTCTGATGCTTGCTATGGTTGCGAAATACCTTCGAATAGCTCCAGAATATCTTGTGGACACTCTCCAATTGGTTTCCCTTTGACTAATTCAATTCCAAAACCTCTGCTGGATTCGAGAGGAGACGAACAATGCCTAGAAGAACTGATCAGCATCGTTGCCCCGACCATGGATTTTACACAGAAGCAGGAGTGGGAAGAACACAAACTGTCTGTCGACCACAATCCGAGTCGTTCGACCATTAATTCTTGGGTTTTGGCTGATGAAGTTATGAATCCACTAAATCAGAGAATGGATCAAAATGACTCAGTTAAAGTGGAAAAGTTCGATGCATCATCGGTGATTGGCCAATCAAACGACAATTTTACATCTTTTGGGCAGCACAATTTACTCAAAAATCTTGTTGGAGAGACAAAGACAAAGTTCAATGCAAACAACATCTTAAATACGGCACAACATGGATTCATTCCAAGTGACTTTGATTGA 1887 42.08 FGFNMTLEDTANRFVGDNDRFPVGLRVLAVDDDASCLKLVENLLRKCQYNVTTTNQPMEALKMLRGSKDQFDIVITDVNMPGMDGYKLLELIGLEMDLPVIMLSAHSDTEFVMKGIYHGACDYLVKPCRMAEIKNIWQHVVRKKRMDRKGKNDNSNPDERGFVLAKNSDNLKVGRKRKEQIEGGEDEEDESENEDPSTQKKPRVVWSVELHRKFVAAVTQLTLKKAVPKKILDLMNVEGLTRENVANYLFCSFGHLMLQKYRLYLKRISTAGIQQENPMHISMIEGFELSGSQIFSSNALSSYPMVEVLGEQSPSGLNLRGIVSRKLIRHSTSRDLNNSLDSFIKFPQSQSPDLFNEIPTSLDLTDLHQGKSLYREFNPISTTPDFSYAPNFPDNKVALNSSNDSIWRFPANCMILDGKNHGAITPLKSESFKIDGNVALNLLGHDQSNGNWQQGVHLSKFPPTGLGSSDACYGCEIPSNSSRISCGHSPIGFPLTNSIPKPLLDSRGDEQCLEELISIVAPTMDFTQKQEWEEHKLSVDHNPSRSTINSWVLADEVMNPLNQRMDQNDSVKVEKFDASSVIGQSNDNFTSFGQHNLLKNLVGETKTKFNANNILNTAQHGFIPSDFD 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16879739 16882632 + Bpe010811.1 Bpe13g01134 113914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01134 628 CDD REC_typeB_ARR-like 27 141 - -
Bpe13g01134 628 Pfam Response regulator receiver domain 27 135 IPR001789 GO:0000160
Bpe13g01134 628 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 606 - -
Bpe13g01134 628 SMART REC_2 25 137 IPR001789 GO:0000160
Bpe13g01134 628 Gene3D - 197 269 - -
Bpe13g01134 628 SUPERFAMILY CheY-like 24 149 IPR011006 -
Bpe13g01134 628 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 201 247 IPR006447 GO:0003677
Bpe13g01134 628 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Bpe13g01134 628 MobiDBLite consensus disorder prediction 173 201 - -
Bpe13g01134 628 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 606 IPR045279 GO:0009736
Bpe13g01134 628 Gene3D - 25 159 - -
Bpe13g01134 628 SUPERFAMILY Homeodomain-like 198 267 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00636 Bpe13g01134 CCT
Bpe02g02148 Bpe13g01134 CCT
Bpe01g00636 Bpe13g01134 ECH
Bpe02g02148 Bpe13g01134 ECH
Bpe08g00654 Bpe13g01134 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00636 Bpe-Chr1:4288469 Bpe13g01134 Bpe-Chr13:16879739 2.15E-121 dispersed
Bpe08g00654 Bpe-Chr8:6676192 Bpe13g01134 Bpe-Chr13:16879739 7.40E-144 dispersed
Bpe13g01134 Bpe-Chr13:16879739 Bpe13g01498 Bpe-Chr13:20363692 4.70E-77 dispersed
Bpe13g01134 Bpe-Chr13:16879739 Bpe02g02148 Bpe-Chr2:22793869 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22353 PF00072 Response_reg 3.20E-25 CL0304 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01134 K14491 - jre:109012904 505.753