Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01153 ATGTCCTTCACAATAGTTAATGGAATCAGCACTGAAAGAGACTCTTTCGTCGTCCCCTTACTCTCTTCTCAGAGATCCGCCCTTAACTGTTCTTCCCAGGTCGCCATTGTCGGGTCTAAAGTCTGCCCCATCGAGAGCCTCGACTACGAGATTTTTGAGAATGAGATCTTCAAACAGGATTGGAGGAGCCGTCGGAAGTTGCAGATTTTTGAGTATACATTTATGAAGTGGCTTTTGTGCTTTCTGATTGGTCTCATCGTTAGTGTTATTGGCTTCTGCAATAATCTCTCCGTCGAGATCATTGCTGGTGTTAAATTGGTCGTCACCTCCAATATGATGCTCAAGAACAGGTATTGGATGGCGTTTCTTGTTTTTTTAATTTCGAATTTGGCCCTCACTCTATTTGCTGCTCTGATCACGATATTGATCTCCCCGGCCGCGGCCGGATCGGGTATTCCGGAAGTCAAAGCCTATTTGAATGGCGTTGACGCGCCGAGAATTTTTTCGATAAAAACGCTGATTGTGAAGGTGGTTGGCAGCATTTCGGTGGGATCGTCGTCTTTGCTAGTAGGAAAGGCGGGGCCTATGGTGCATACCGGTGCTTGCGTTGCATCTCTGCTAGGTCAGGGCGGGTCGACGAAATATCATTTGACATGTAGATTTCTTCGGTATTTCAGGAACGACAGAGACCGGCGCGATCTCATAACGTGCGGGGCAGCTGCCGGAATCGCAGCTGCTTTTCGTGCTCCGGTGGGTGGTTTGCTCTTCGCTTTCGAAGAGATGGTATCTTGGTCCGTTCTGTTTTATTTCTCTTATACCTTGCTACGACAAACGACTATTTATACATGTCAATTTTTGCTAATACTTTCGTTAAACAGGTGGCGGAGTGCCCTTTTGTGGCGGGCATTTTTCACGACGGCCATCGTTGCGATTATATTACGATCGTTAATCGATGTTTGCTTAAGTGGAAGATGTGGATTATTTGGAACTGGAGGTCTGATAATGTTTGATGTGTATTCAGAATCTGTAACATATCATCTAGTGGATGTTCCTTCGGTGCTCGCCCTCGGAGTCATCGGAGGGATACTCGGAAGCTTCTTCAACTTCATTTTAGGCAAAGTTCTTCGACTTTACAGTCTGGTAAACGAGAAAGGCGTTGCTTACAAGATTCTGCTCGCCGCCGCCGTCTCGATTTTCACATCCTGCCTTCTTTTCGGATTACCGTGGCTCGGAACTTGCCAGCCTTGCCCGACGACCTCATCGGAAGAGTGTCCGACAATCGGACGGTCAGGGAAATACAACAAATTTCAATGTTCGGCCGATCACTACAACAATCTCGCTAGTCTCATATTCAACACCAGCGACGACGCGATTAAACATCTCTTCAGCAAAGATTCCGACTCGGAGTTTCAATACTCGTCGATCATCATATTTTTCATCACCTGCTATTGCTTAAGCATTATCAGCTATGGAGTTGTGGCTCCGATCGGTCTGTTTATCCCCGTCATCCTGACCGGAGCTTCCTACGGGCGTTTGGTCGGGATGTTAGTGGGTTCGCGCACGAAGCTCGACCACGGGCTTTTCGCCGTACTCGGAGCGGTCTCGTTGCTTGGAGGTACGATGAGAATGACGGTGTCTCTCTCCATCATCATCCTCGAACTGACCAACAATCTCTTATTGCTTCCTCTGATAATGGTGGTTTCTCTCGTCTCCAAAACCGTCGCCGATGCGTTCAACAGCAATATCTACGACCAAATCATGAAAGCCAAAGGGTTTCCATATCTCGAGTCCCATGCCGAGCCGTACATGCGGCAGCTGACGGTCCGCGACGTCGTCATGGGTCCGCTTCAGATATTTCAAGGGATCGAGAAAGTGAGTAATATCGTACATGTTCTTAGAATGACAAGACATCATGGTTTTCCTGTCGTCGACGAGCCTCCATTCTCCGATGCCCCTGTTCTGTTCGGAATTGTTCTTCGAGCCCATTTGATCACGTTGTTGAAGAAGAAAGCTTTCTTAACAACGACGGTGCCGATCGATATTAGTGCTTATACGCAATTATCAGCCGGAGATTTCGCGAAGAGGGGATCGAATAACACACAGGATATTGAGGACGTGGAATTGACCGAGGAAGAGATGGGGATGTTCGTCGATCTCCATTTGTTCAGTAATGCTTCGCCTTACACGGTTGTGGAAACGATGTCACTAGCGAAAGCTCTGGTTCTTTTCCGGCAAGTTGGATTAAGACATATGCTCGTCATTCCAAAAGTTTCCGGCAGATCGCCGGTCGTGGGTATATTAACGCGGCACGATTTCATGTCGGAACACATACTGGGTTTGTATCCTTCGCTGGTGAAAAGCAGGTGGAAGAGACTCAGAATCCAGATTCCGCAGTTGAGTAGATACTTCAAATGA 2415 47.54 MSFTIVNGISTERDSFVVPLLSSQRSALNCSSQVAIVGSKVCPIESLDYEIFENEIFKQDWRSRRKLQIFEYTFMKWLLCFLIGLIVSVIGFCNNLSVEIIAGVKLVVTSNMMLKNRYWMAFLVFLISNLALTLFAALITILISPAAAGSGIPEVKAYLNGVDAPRIFSIKTLIVKVVGSISVGSSSLLVGKAGPMVHTGACVASLLGQGGSTKYHLTCRFLRYFRNDRDRRDLITCGAAAGIAAAFRAPVGGLLFAFEEMVSWSVLFYFSYTLLRQTTIYTCQFLLILSLNRWRSALLWRAFFTTAIVAIILRSLIDVCLSGRCGLFGTGGLIMFDVYSESVTYHLVDVPSVLALGVIGGILGSFFNFILGKVLRLYSLVNEKGVAYKILLAAAVSIFTSCLLFGLPWLGTCQPCPTTSSEECPTIGRSGKYNKFQCSADHYNNLASLIFNTSDDAIKHLFSKDSDSEFQYSSIIIFFITCYCLSIISYGVVAPIGLFIPVILTGASYGRLVGMLVGSRTKLDHGLFAVLGAVSLLGGTMRMTVSLSIIILELTNNLLLLPLIMVVSLVSKTVADAFNSNIYDQIMKAKGFPYLESHAEPYMRQLTVRDVVMGPLQIFQGIEKVSNIVHVLRMTRHHGFPVVDEPPFSDAPVLFGIVLRAHLITLLKKKAFLTTTVPIDISAYTQLSAGDFAKRGSNNTQDIEDVELTEEEMGMFVDLHLFSNASPYTVVETMSLAKALVLFRQVGLRHMLVIPKVSGRSPVVGILTRHDFMSEHILGLYPSLVKSRWKRLRIQIPQLSRYFK 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 16981922 16984847 - Bpe010829.1 Bpe13g01153 113933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01153 804 PANTHER CHLORIDE CHANNEL PROTEIN 292 796 - -
Bpe13g01153 804 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 12 265 - -
Bpe13g01153 804 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 292 796 - -
Bpe13g01153 804 SUPERFAMILY Clc chloride channel 54 598 IPR014743 -
Bpe13g01153 804 Gene3D - 596 776 IPR046342 -
Bpe13g01153 804 PRINTS Chloride channel signature 544 563 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 526 542 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 582 596 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 494 514 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 ProSiteProfiles CBS domain profile. 722 783 IPR000644 -
Bpe13g01153 804 CDD CBS_pair_voltage-gated_CLC_euk_bac 607 775 - -
Bpe13g01153 804 SUPERFAMILY CBS-domain pair 598 774 IPR046342 -
Bpe13g01153 804 Pfam CBS domain 726 774 IPR000644 -
Bpe13g01153 804 SMART cbs_1 726 777 IPR000644 -
Bpe13g01153 804 SMART cbs_1 615 668 IPR000644 -
Bpe13g01153 804 Gene3D Clc chloride channel 68 595 - -
Bpe13g01153 804 Pfam Voltage gated chloride channel 133 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bpe13g01153 804 PRINTS Plant CLC chloride channel signature 446 462 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe13g01153 804 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe13g01153 804 PRINTS Plant CLC chloride channel signature 322 329 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe13g01153 804 PRINTS Plant CLC chloride channel signature 304 314 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bpe13g01153 804 PANTHER CHLORIDE CHANNEL PROTEIN 12 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02140 Bpe-Chr2:22738391 Bpe13g01153 Bpe-Chr13:16981922 0 dispersed
Bpe07g00038 Bpe-Chr7:328195 Bpe13g01153 Bpe-Chr13:16981922 0 dispersed
Bpe11g01498 Bpe-Chr11:11105088 Bpe13g01153 Bpe-Chr13:16981922 0 dispersed
Bpe13g01153 Bpe-Chr13:16981922 Bpe05g00733 Bpe-Chr5:20807724 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01153 K05016 - pop:18099916 1116.68