Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01156 ATGACGAGCTGCGTCAATGTTGCACCCGAGCAACTTTGCTACATACCCTGCAATTTTTGCCATATTGTTCTTGCGGTGAATGTTCCATGCAGCTATATGTTTGACATTGTCACCGTCCTATGTGGTCACTGCAAAAATCTCTGGTCTGTGAACATGGCATCTGCATTTCAGTCACGTTCATGGCAAGATCCCCAGGCTCAAATTTACTCTTACAATCGACCCGACCATTATCGAATCCACTCAAGGTCCTCGTCCAAATACAACAACAAGATCATGACACTTTGTCTTCAGACCAAAAACTCGAATTCAGCTGAGAGGCTTGCGAGTCGAACTCCAGAGAAGAGGCAACGGGTTCCTTCTGCTTATAATCAGTTCATAAAGGAAGAAATTCAAAGGATCAAGGCCAATAAGCCAGATATTTCCCACAGGGAAGCATTTAGCACTGCTGCAAAAAATGTGAGTGGTAATTAA 471 43.74 MTSCVNVAPEQLCYIPCNFCHIVLAVNVPCSYMFDIVTVLCGHCKNLWSVNMASAFQSRSWQDPQAQIYSYNRPDHYRIHSRSSSKYNNKIMTLCLQTKNSNSAERLASRTPEKRQRVPSAYNQFIKEEIQRIKANKPDISHREAFSTAAKNVSGN 156
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17012747 17014644 + Bpe010832.1 Bpe13g01156 113936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01156 156 PANTHER AXIAL REGULATOR YABBY 5 1 153 - -
Bpe13g01156 156 SUPERFAMILY HMG-box 106 149 IPR036910 -
Bpe13g01156 156 Pfam YABBY protein 8 152 IPR006780 GO:0007275
Bpe13g01156 156 PANTHER PROTEIN YABBY 6-RELATED 1 153 IPR006780 GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00747 Bpe-Chr1:6729826 Bpe13g01156 Bpe-Chr13:17012747 4.54E-68 dispersed
Bpe08g00230 Bpe-Chr8:1302089 Bpe13g01156 Bpe-Chr13:17012747 1.90E-44 dispersed
Bpe13g01156 Bpe-Chr13:17012747 Bpe05g01079 Bpe-Chr5:23283427 3.29E-36 dispersed
Bpe13g01156 Bpe-Chr13:17012747 Bpe02g02129 Bpe-Chr2:22651365 1.08E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22354 PF04690 YABBY 2.80E-55 CL0114 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01156 K25796 - mnt:21395565 217.624