Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01166 ATGGCCGGAGATGGAGTTTTTGCAGAGCTGTTGGACGGGGAAGTGTACAAGTACTATGCTGAGGGAGAATGGAAGAAATCTTCATCGGGGAAAAGCGTTTCCATCATCAACCCCACTACTCGAAAGACTGAGTACAGGGTTCAAGCTTGTACACAAGAAGAGGTGAATAAAGTGATGGAAATATCAAAAGCTGCTCAGAAATCTTGGGCCAAGACTCCATTATGGAGGAGGGCAGAGCTTCTTCACAAAGCAGCTGCCATACTCAAAGATCACAGAGCCAAAATAGCAGAGTGTCTGGTTAGAGAAATAGCAAAACCAGCAAAAGATGCGGTAACAGAGGTTGTGAGGTCTGGAGATCTTGTTTCTTACACTGCTGAAGAGGGAGTTAGGATTTTGGGAGAGGGGAAGTTTTTAGTTTCTGACAGTTTCCCTGGAAATGAGAGGACAAAATACTGCCTTACTTCGAAGATCCCACTGGGTGTAGTTTTAGCCATTCCCCCGTTTAACTATCCCGTCAACTTGGCTGTCTCAAAAATAGCTCCTGCACTGATAGCCGGAAACTCACTCGTGCTTAAACCTCCAACTCAGGGAGCTGTTTCTGCCCTTCACATGGTGCATTGCTTTCATTTGGCTGGATTTCCCAAAGGCCTTATCAATTGTGTCACCGGTAAAGGCTCTGAGATCGGCGACTTCCTTACTATGCATCCGGGCGTTAATTGTATAAGCTTCACGGGTGGGGACACAGGTGTCGCAATTTCGAAGAAGGCGGGAATGATACCTCTTCAGATGGAGTTGGGAGGAAAAGATGCCTGTATTGTGCTTGAGGATGCAGACTTAGATTTAGTAGCTGCAAACATAATAAAAGGAGGTTTCTCCTACAGTGGTCAAAGGTGTACAGCTGTTAAGGTTGTCTTGGTGATGGAATCTGTTGCCGATGCTTTGGTCGAGAAAGTGAACACCAGAGTGGCAAAATTGACGGTAGGACCACCAGATGACGACTGCGATATTACTCCGGTCGTGACTGAGTCATCTGCAAATTACATTGAAGGGTTGGTTCTAGACGCCAAAGAGAAAGGGGCAACATTTTGCCAAGAGTACAAGAGAGAAGGCAACCTAATTTGGCCATTGTTGTTAGATAATGTCAGGCCGGACATGAGGATCGCATGGGAAGAACCCTTTGGGCCTGTTTTGCCGGTTATTAGAATAAGTACTGTCGAAGAGGGAATTCACCACTGTAACGCAAGTAATTTCGGACTCCAGGGATGTGTGTTCACAAAGGATATGAACAAAGCCATGCTAATCAGTGATGCAATGGAGACCGGAACCGTTCAAATCAACTCGGCCCCGGCACGAGGCCCTGACCATTTTCCGTTCCAGGGTATTAAAGACAGTGGAATTGGGTCACAAGGCATCACCAACAGCATCAACATGATGACCAAGGTGAAAACAACTGTTATTAACTTACCATTCCCCTCTTATACCATGGGTTAA 1491 46.08 MAGDGVFAELLDGEVYKYYAEGEWKKSSSGKSVSIINPTTRKTEYRVQACTQEEVNKVMEISKAAQKSWAKTPLWRRAELLHKAAAILKDHRAKIAECLVREIAKPAKDAVTEVVRSGDLVSYTAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVSALHMVHCFHLAGFPKGLINCVTGKGSEIGDFLTMHPGVNCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNTRVAKLTVGPPDDDCDITPVVTESSANYIEGLVLDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRISTVEEGIHHCNASNFGLQGCVFTKDMNKAMLISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPFPSYTMG 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17091182 17094407 + Bpe010841.1 Bpe13g01166 113946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01166 496 CDD ALDH_F11_NP-GAPDH 15 487 - -
Bpe13g01166 496 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 496 - -
Bpe13g01166 496 Pfam Aldehyde dehydrogenase family 24 483 IPR015590 GO:0016491
Bpe13g01166 496 PANTHER ALDEHYDE DEHYDROGENASE 1 496 - -
Bpe13g01166 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 457 IPR016163 GO:0016620
Bpe13g01166 496 SUPERFAMILY ALDH-like 15 487 IPR016161 GO:0016491
Bpe13g01166 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Bpe13g01166 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 483 IPR016162 GO:0016491
Bpe13g01166 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g01166 Bpe-Chr13:17091182 Bpe07g00475 Bpe-Chr7:8120640 1.81E-66 dispersed
Bpe13g01166 Bpe-Chr13:17091182 Bpe07g00332 Bpe-Chr7:2577939 4.29E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01166 K00131 - sly:101262732 939.102