Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01167 ATGCAGCCCTGTAGCAGAGAAATGAATCAAGACCTCCTCAACAATCACCTCCAGATCCAACCCTCTCACTTTCTTCCCCACCAGACTTCTCACTTCGATCCATCTTCTTCTCACGACGATTTTCTCGAGCAAATGTTTTCCACTGTCCCTTCGTCTACCTGGCCGGACCTCAATCCACCCATCAACTCTGCCATTACTGCCGGCTCCGGAAAGCTCAGAGACCTTTCCGATGAAACTCCGCCCTCGAATCAGGAAAATGCTGCTTATCCGTATGACGAGTCGGTAAACTTGGTCTCCAAGCTCCGTAGCCACCAGATCAGCGGGGGCTCTCCGGCTGCAAAGGCAGCGGCGATGATGCTTCAACAGCACCTCTTGATGTCCAGAGGAATCACTGGCGCCGGTGATAACAACTCGTCTGGACTTCTTCCGATGCCTTTGTCTTTGGAGACGACTCAAAACGACGTTGTTGATGGCTTGTCTACATTCAAATCTCAAAATCCAGTGAGTTTAACACAGTTTGTGCTTGATCAAGCTGTCTACAATGGATTTGCTGCGCAGACGTTAAATCATCCTCAACATTTTCACCAACCTCAATCGCAAAACTACGGAGCTTCAGGATCGGCGATGAACCAAATTCCAGCGGGTGGCTCCGCAGGAGCTCCAGCGACTCAACCTAGACAGCGAGTGAGGGCGCGGAGAGGTCAAGCAACTGACCCTCATAGCATAGCTGAAAGATTGAGGAGGGAGAGAATTGCAGAGAGAATGAAAGCTCTGCAAGAACTGGTTCCTAACGCCAACAAGCAGACAGACAAGGCTTCCATGCTTGATGAGATTATCGACTACGTTAAATTCCTCCAGCTTCAAGTCAAGGTTCTAAGCATGAGCAGATTAGGAGGTGCTGCAGCTGTTGCTCCCCTTGTTGCCGATTTGTCTTCTGAGGGAGGGGGAATAGGTGGAGGAGGAGGAGGTGAATGTGTACCAGCCGTCGGCCGTCCGGGTGGACCAAAAACGGCGCCGTCGAACGACAGCCTGGCGGTGACGGAGCACCAGGTGGCGAAAATGATGGAAGAGGATATGGGGTCCGCCATGCAGTATCTCCAAGGGAAAGGGCTGTGCTTGATGCCTATTTCTTTGGCGACTGCCATCTCGACGGCCACGTGTCACTCTAGGAACCCCTTGATTAAACGACCCTCCTCCCCCAACATGTCTGCTTTGACCGTCCAGTCAGCTTCCTTAGTTAACGCCGCTACTGACCTCGCCGTCAAAGAAGCAGCTTCCATTTCCAAGCCGTGA 1293 52.05 MQPCSREMNQDLLNNHLQIQPSHFLPHQTSHFDPSSSHDDFLEQMFSTVPSSTWPDLNPPINSAITAGSGKLRDLSDETPPSNQENAAYPYDESVNLVSKLRSHQISGGSPAAKAAAMMLQQHLLMSRGITGAGDNNSSGLLPMPLSLETTQNDVVDGLSTFKSQNPVSLTQFVLDQAVYNGFAAQTLNHPQHFHQPQSQNYGASGSAMNQIPAGGSAGAPATQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKQTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADLSSEGGGIGGGGGGECVPAVGRPGGPKTAPSNDSLAVTEHQVAKMMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLIKRPSSPNMSALTVQSASLVNAATDLAVKEAASISKP 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17101286 17104510 + Bpe010842.1 Bpe13g01167 113947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01167 430 Coils Coil 248 268 - -
Bpe13g01167 430 PANTHER TRANSCRIPTION FACTOR BHLH69 30 395 - -
Bpe13g01167 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 233 296 IPR036638 GO:0046983
Bpe13g01167 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 285 IPR011598 GO:0046983
Bpe13g01167 430 Gene3D - 232 300 IPR036638 GO:0046983
Bpe13g01167 430 SMART finulus 241 291 IPR011598 GO:0046983
Bpe13g01167 430 MobiDBLite consensus disorder prediction 193 212 - -
Bpe13g01167 430 Pfam Helix-loop-helix DNA-binding domain 240 286 IPR011598 GO:0046983
Bpe13g01167 430 MobiDBLite consensus disorder prediction 231 245 - -
Bpe13g01167 430 MobiDBLite consensus disorder prediction 193 245 - -
Bpe13g01167 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 30 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00393 Bpe-Chr10:11477617 Bpe13g01167 Bpe-Chr13:17101286 2.27E-56 dispersed
Bpe11g01332 Bpe-Chr11:9959231 Bpe13g01167 Bpe-Chr13:17101286 3.80E-57 dispersed
Bpe13g01167 Bpe-Chr13:17101286 Bpe06g00416 Bpe-Chr6:15556085 9.10E-24 dispersed
Bpe01g00640 Bpe-Chr1:4315263 Bpe13g01167 Bpe-Chr13:17101286 7.56E-134 wgd
Bpe13g01167 Bpe-Chr13:17101286 Bpe02g02124 Bpe-Chr2:22621844 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22356 PF00010 HLH 1.30E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01167 - - jre:109012891 474.937