Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01174 ATGGAAGCCAGCGCAGGCCTCGTTGCTGGCTCGCACAACCGAAACGAGCTCGTCGTCATTCACGGCCACGATGAGCCGAAGCCCTTGAGGAATTTGGACGGTCAGGTTTGCGAAATATGTGGAGATGAAGTGGGAACTACGGTGGACGGAGATCTGTTCGTTGCCTGTAATGAATGTGGTTTTCCTGTTTGTCGGCCGTGTTACGAGTATGAGAGAAGAGAAGGGAGCCAGCTCTGGAGTCCCAGAGTTCAAGGCGATGAAGACGAAGAGGATGTGGATGATATTGAGCATGAATTCAACATTGAGCATGAGAAGAACAAGCACAAACATCTTGCAGAAGCTATGCTTCATGGAAAGATGAGTTATGGAAGAGGTCCGGAAGAAGATGACAACCCTCAATTACATCAGGTGAGTGGTGAGCTCACCATATCATCTCATGGCCATGGCGATCAAATGTTGTCATCTTCCCTGCATAAACGAGTGCATCCATATCCTGCTTCCGAACTTGGAAGTGAGCGATGGGACGAGAAGAAAGATGAAGGATGGAAAGAGAGAACGGATGACTGGAAATTACAACAAGGCAATTTGGGGCCCGAGCCTGATGATGACTCTGACATGGCCATGATTGATGAAGCAAGGCAGCCACTTTCAAGGAAAGTACCCATAGCGTCAAGCAAAGTAAATCCTTATCGGATGATCATTGTGGCTCGGCTTGTTATTCTTGCCTTCTTCCTTCGTTACAGGATTTTAAACCCTGTGCATGATGCATTTGGGCTCTGGTTAACTTCTGTGATATGCGAAATCTGGTTTGCTTTCTCATGGATTCTCGATCAGTTTCCTAAATGGTTTCCAATCGATCGCGAGACTTATCTTGATCGCCTTTCTCTCAGGTATGAACGAGAGGGCGAACCTAACATGCTTGCACCTGTAGATATCTTCGTTAGTACTGTGGATCCATTGAAGGAACCTCCTCTTGTTACAGCTAATACAGTTCTTTCAATCTTAGCCATGGACTACCCAGTAGACAAAATTTCATGTTACATTTCTGATGATGGAGCTTCTATGCTCACCTTTGAAACCATGTCATTAACAGCAGAATTTGCACGTAAATGGGTACCCTTCTGTAAAAAGTTTTCTATAGAACCTCGAGCCCCTGAAATGTATTTCTCAGAGAAGATGGATTACCTCAAAGATAAAGTCCAGCCTACATTTGTCAAAGAACGTCGAGCAATGAAGAGAGAGTACGAGGAATTCAAAGTTAGAACAAATGCTCTCGTGGCGAAAGCCATGAAAGTTCCTCCAGAAGGATGGATTATGCAAGATGGAATTCCATGGCCTGGAAATAACACCAAGGATCACCCTGGTATGATTCAAGTTTTTCTTGGTCATAGTGGAGGACTCGATGCCGAAGGAAATGAGCTACCTCGCCTTGTTTATGTTTCTCGTGAAAAAAGGCCGGGTTTCCAACATCACAAGAAAGCCGGAGCCATGAACGCTTTAATTCGGGTCTCTGCAGTTCTTACAAATGCTCCTTTTATGCTGAATTTGGATTGTGATCATTACATAAACAACAGCAAGGCAGTGAGAGAAGCCATGTGTTTTCTAATGGATTCTATAATCGGAAAGAAAGTTTGTTATGTGCAGTTCCCACAACGATTCGACGGAATCGACAGGCATGATCGTTATGCCAATAGAAACACAGTCTTCTTTGATATTAATATGAAAGGTCTAGACGGAATTCAAGGTCCTGTATACGTGGGCACTGGATGTGTTTTCAGAAGGCAAGCTTTATATGGATATGAACCTCCAAAGAGGCCAAAGCGCCCAAAGATGATAAGTTGCGACTGTTGCCCGTGTTTCGGACGTCGCAAGAAGCTGAGCAAGTATTCTAAGCATACGGATGGAGATACAGCAGCAGGAATCGAAGATGACAAGGAATTATTGATGTCCCAAATGAACTTTGAGAATAAATTTGGACAGTCAGCAATTTTTGTCACGTCTACTTTAATGGAAGAAGGTGGTGTTCCTCCTTCCTCAAGTCCAGCATCACTGCTTAAAGAGGCAATCCATGTCATCAGTTGCGGCTATGAAGACAAAACAGAATGGGGTATTGAGCTTGGTTGGATTTATGGATCTATCACAGAGGATATCTTAACTGGGTTTAAGATGCATTGTCGTGGATGGAGATCGATATATTGCATGCCTAAAAGGGCTGCCTTTAAGGGAACTGCTCCAATCAACTTGTCTGATAGACTAAACCAGGTGCTTCGTTGGGCTCTTGGCTCCATTGAAATCTTCTTCAGTCGCCATTGTCCTGTTTGGTATGGCTATAAAGGAGGAAAGCTCAAGTGGCTTGAGAGATTTGCTTATGTTAATACAACTGTTTATCCCTTCACATCAATCCCTCTCCTGGCCTACTGCATCCTCCCTGCCATTTGCCTGCTCACGGATAAATTCATCATGCCTCCGATAAGCACATTTGCAAGCCTCTTCTTCATAGCTCTGTTCCTTTCCATCTTCGCAACGGGGATTCTCGAGCTTAGATGGAGCGGAGTGAGCATAGAAGAATGGTGGAGAAATGAGCAATTCTGGGTGATAGGTGGTGTCTCAGCTCATCTCTTTGCAGTCATTCAAGGCCTGCTAAAGGTTTTGGGTGGAATTGACACAAATTTCACTGTTACATCTAAAGCAGTCGACGATGAAGATTTCGGAGAATTATACACATTCAAATGGACAACTCTTTTGATTCCTCCAACAACAATCTTAGTCATCAATCTTGTAGGAGTTGTAGCTGGTATTTCAGATGCTATAAACAATGGGTATCAATCTTGGGGACCTCTATTTGGAAAACTTTTCTTTTCCTTCTGGGTAATTCTTCACCTCTACCCCTTCCTTAAAGGTCTAATGGGTCGGCAAAACAGGACTCCGACGATCGTCGTCATATGGTCAGTTCTCTTGGCTTCCATCTTCTCTTTGCTGTGGGTTAGGATTGATCCTTTTGTGATGAAAACTAAAGGCCCTGATGTGAAGCAGTGCGGAATTAATTGCTGA 3051 44.02 MEASAGLVAGSHNRNELVVIHGHDEPKPLRNLDGQVCEICGDEVGTTVDGDLFVACNECGFPVCRPCYEYERREGSQLWSPRVQGDEDEEDVDDIEHEFNIEHEKNKHKHLAEAMLHGKMSYGRGPEEDDNPQLHQVSGELTISSHGHGDQMLSSSLHKRVHPYPASELGSERWDEKKDEGWKERTDDWKLQQGNLGPEPDDDSDMAMIDEARQPLSRKVPIASSKVNPYRMIIVARLVILAFFLRYRILNPVHDAFGLWLTSVICEIWFAFSWILDQFPKWFPIDRETYLDRLSLRYEREGEPNMLAPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYISDDGASMLTFETMSLTAEFARKWVPFCKKFSIEPRAPEMYFSEKMDYLKDKVQPTFVKERRAMKREYEEFKVRTNALVAKAMKVPPEGWIMQDGIPWPGNNTKDHPGMIQVFLGHSGGLDAEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDSIIGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYEPPKRPKRPKMISCDCCPCFGRRKKLSKYSKHTDGDTAAGIEDDKELLMSQMNFENKFGQSAIFVTSTLMEEGGVPPSSSPASLLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGTAPINLSDRLNQVLRWALGSIEIFFSRHCPVWYGYKGGKLKWLERFAYVNTTVYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFIALFLSIFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLGGIDTNFTVTSKAVDDEDFGELYTFKWTTLLIPPTTILVINLVGVVAGISDAINNGYQSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDVKQCGINC 1016
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17147738 17152106 - Bpe010849.1 Bpe13g01174 113954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01174 1016 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 20 97 IPR013083 -
Bpe13g01174 1016 Pfam Zinc-binding RING-finger 27 92 IPR027934 -
Bpe13g01174 1016 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 447 601 IPR029044 -
Bpe13g01174 1016 Pfam Cellulose synthase 310 1010 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe13g01174 1016 SUPERFAMILY Nucleotide-diphospho-sugar transferases 324 839 IPR029044 -
Bpe13g01174 1016 SUPERFAMILY RING/U-box 21 97 - -
Bpe13g01174 1016 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 7 [UDP-FORMING] 1 1016 - -
Bpe13g01174 1016 CDD mRING-HC-C4C4_CesA_plant 35 77 - -
Bpe13g01174 1016 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1016 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00568 Bpe-Chr2:3665264 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe06g00341 Bpe-Chr6:14838221 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe08g01089 Bpe-Chr8:12987676 Bpe13g01174 Bpe-Chr13:17147738 8.62E-126 dispersed
Bpe10g00547 Bpe-Chr10:12530451 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe11g01127 Bpe-Chr11:8410840 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe12g00208 Bpe-Chr12:1655957 Bpe13g01174 Bpe-Chr13:17147738 1.42E-132 dispersed
Bpe13g01174 Bpe-Chr13:17147738 Bpe15g00391 Bpe-Chr15:15437699 0 dispersed
Bpe13g01518 Bpe-Chr13:20713105 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe13g01174 Bpe-Chr13:17147738 Bpe04g00051 Bpe-Chr4:446891 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01174 K10999 - csv:101214842 1906.34