Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01196 ATGCTCTCAAGATCCTCTCTAACCTCATTTAATCTAACGTCATTTGATGATTTCCCGGCTCTGAATCGGATTCCAAGAGTAATGACGGTTTCCGGCGTTTTATCTCGATTCGAAGCTGAAGAAGACGACGATTCTAGCGGTAGATTATCGTCGCCGGAGCGGCGGATCGTCGTTTCGAACCAGTTGCCGATTCGAGCTCGTCGGGATGTGGAAACTGGAAAATGGGAGTTTGAGTTTGATTCCGATAGCCTGGTTTTGCAGCTGAAAGATGGGTTTTCTCCGCAGGTCGAGGTGATGTACGTCGGCTCTCTCAACGCCGATATCGACTTTTCCGACCAAGATCGGGTTTCTCAACTTCTCCTTGCGAAATTCCGGTGTGTGCCGACGTTCTTACCATCTGAAATTCAAATTAAGTTCTATCATGGGTTTTGCAAGCATTATCTATGGCCTCTGTTTCACTACATGTTACCTTTATCTCCGGGAAACGGCGACCAGTTCAACAGGGAAAATTGGCAAGCTTACGTATCGGCGAACAAGATTTTCGCCGACAAAATCATGGAGGTTATTAACCCGGAAGATGATTACGTCTGGATTCATGATTATCATCTAATGATTTTGCCAACCTTTTTGAGGAGAAGGTTTCACCGGATTAAGCTCGGATTCTTCTTGCACAGTCCGTTTCCATCGTCGGAAATCTACCGATCTCTTCCGGTCCGAGAGGAGATCTTGCGGGGCCTATTGAACTCCGATCTGATAGGGTTTCACACGTTCGACTACGCCAGACATTTTCTCTCTTGTTGCAGTAGAATGTTGGGTCTTGATTATGAATCGAAACGGGGCTACATCGGACTAGATTATTACGGCAGAACCGTCAGCATCAAGATCCTTCCGATCGGAATTCATATGGGACAGCTTGAATCTATTCTTTCTCTCTCTTCCACCGCTGACAAGGTCAAGGAACTGAGAGAGAGATTCAGAGGGAAAATCGTCATGTTGGGGGTCGACGATATGGATTTGTTCAAAGGAATTAGTTTGAAATTTCTTGCAATGAAGCAATTATTAGAACAGAGGACCGATTTAAGAGGAAAAGTTGTGTTGATTCAGATTACAAACCCGGCAAGAAGCCGAGGAAGAGATGTTCAAGACGTTGAAAATGAGATCAAATCCGAAGCTGATGAAATCAATAGTAAATTCGGGGAAGAACAATGGGAGCCGATAATTCTCATCAACGGCCCCGTCGCAACCTCAGAAAAAGCCGCCTACTTCGCCATTGCCGAATGCTGTGTAGTAAACGCTGTTAGAGACGGAATGAACTTAGTGCCATACAAATACACCGTATGTCGTCAAGGCAATCCAGTCTTAGATAAAGCCTTATCGATCGACGATTCCTCACAGCCTCGGAAAAGCATTCTGATCGTCTCGGAATTTATCGGATGCTCCCCATCGTTAAGCGGAGCAATTCGGGTCAATCCGTGGAATATTGAGGCCGTATCCGATGCGATGAATTTGGCAATTACAATGGGGGAGACCGAGAAAGGATTGAGACATGAAAAACATTACAAGTACATAAGTTCTCATGATGTATCGTACTGGGCGAGGAGTTTCGACCATGATCTCGAAAGGGTTTGTCGGGATCATTACACAAAGAGGTGTTGGGGGATCGGATTTGGCTTGGGGTTTAGAGTCGTTGCGTTGGGACCTCATTTTCGGAAACTTACAGTCGATCATATCGTTTCGGCTTATAAGAAGACTAAAAATAGGTTGATTTTGTTGGATTATGATGGAACTATGACCCCAAATGGATCTGTGGATAAAGCTCCTAGCAGTGAAGTTATTTCTGTGTTGAATTGTCTCTGTAGTGACCCTACGAATGTGGTTTTTATTGTGAGTGGCAGAGGGAAAGATTGTCTGAGTAAATGGTTCTCCCCTGTTGAGAAACTGGGTATTTCAGCTGAACATGGCTACTTCACGAGGTGGTCTTCTGGACTCAAATGGGAAACTTGCTCTTTGCCCATGGACTTTGACTGGAAAAGAATGGCAGAGCCAGTAATGGCTCTTTACACAGAAGCCACAGATGGTTCATTCATTGAACATAAGGAAAGTGCATTGGTTTGGCACCATCAAGAAGCCGACCCTCATTTCGGCCTATCACAAGCAAAAGAGCTTCTTGATCATTTAGAAAATGTGCTCGCTAACGAGCCCGTCGTCGTGAAACGAGGGCAACACATCGTCGAAGTCAAACCGCAGGGAGTGAGCAAAGGGTTAGTGGTAAAGAGCCTAATCTCTTCATTGGCGAAACAGGGAATATGTCCGGATTTTGTTATGTGTGTAGGAGACGATCGATCGGACGAAGATATGTTCGAGAGCATATCAAATTCTGCTACGGACCCTCCATTACTGGCCACATCCGAGGTTTTTGCCTGCACTGTTGGTCAGAAACCAAGTATGGCAAAATACTATCTTGATGATACTTCTGAGGTCATTAGGTTGCTTCAAGGCCTTGCCATTTCTTCACAACCCAAGCTACAGCCATTTGAATGA 2541 45.1 MLSRSSLTSFNLTSFDDFPALNRIPRVMTVSGVLSRFEAEEDDDSSGRLSSPERRIVVSNQLPIRARRDVETGKWEFEFDSDSLVLQLKDGFSPQVEVMYVGSLNADIDFSDQDRVSQLLLAKFRCVPTFLPSEIQIKFYHGFCKHYLWPLFHYMLPLSPGNGDQFNRENWQAYVSANKIFADKIMEVINPEDDYVWIHDYHLMILPTFLRRRFHRIKLGFFLHSPFPSSEIYRSLPVREEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVSIKILPIGIHMGQLESILSLSSTADKVKELRERFRGKIVMLGVDDMDLFKGISLKFLAMKQLLEQRTDLRGKVVLIQITNPARSRGRDVQDVENEIKSEADEINSKFGEEQWEPIILINGPVATSEKAAYFAIAECCVVNAVRDGMNLVPYKYTVCRQGNPVLDKALSIDDSSQPRKSILIVSEFIGCSPSLSGAIRVNPWNIEAVSDAMNLAITMGETEKGLRHEKHYKYISSHDVSYWARSFDHDLERVCRDHYTKRCWGIGFGLGFRVVALGPHFRKLTVDHIVSAYKKTKNRLILLDYDGTMTPNGSVDKAPSSEVISVLNCLCSDPTNVVFIVSGRGKDCLSKWFSPVEKLGISAEHGYFTRWSSGLKWETCSLPMDFDWKRMAEPVMALYTEATDGSFIEHKESALVWHHQEADPHFGLSQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGLVVKSLISSLAKQGICPDFVMCVGDDRSDEDMFESISNSATDPPLLATSEVFACTVGQKPSMAKYYLDDTSEVIRLLQGLAISSQPKLQPFE 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17326376 17329426 + Bpe010869.1 Bpe13g01196 113976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01196 846 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 840 - -
Bpe13g01196 846 Pfam Trehalose-phosphatase 590 825 IPR003337 GO:0003824|GO:0005992
Bpe13g01196 846 Gene3D Glycogen Phosphorylase B; 307 524 - -
Bpe13g01196 846 CDD HAD_TPP 588 829 - -
Bpe13g01196 846 CDD GT20_TPS 54 540 IPR001830 GO:0003824|GO:0005992
Bpe13g01196 846 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 544 - -
Bpe13g01196 846 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 840 IPR001830 GO:0003824|GO:0005992
Bpe13g01196 846 SUPERFAMILY HAD-like 587 834 IPR036412 -
Bpe13g01196 846 TIGRFAM T6PP: trehalose-phosphatase 585 834 IPR003337 GO:0003824|GO:0005992
Bpe13g01196 846 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 588 789 IPR006379 -
Bpe13g01196 846 Pfam Glycosyltransferase family 20 54 540 IPR001830 GO:0003824|GO:0005992
Bpe13g01196 846 Gene3D - 715 843 IPR023214 -
Bpe13g01196 846 Gene3D - 586 704 IPR023214 -
Bpe13g01196 846 Gene3D Glycogen Phosphorylase B; 47 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02102 Bpe-Chr2:22492674 Bpe13g01196 Bpe-Chr13:17326376 0 dispersed
Bpe10g00831 Bpe-Chr10:14308752 Bpe13g01196 Bpe-Chr13:17326376 0 dispersed
Bpe11g01763 Bpe-Chr11:14021187 Bpe13g01196 Bpe-Chr13:17326376 0 dispersed
Bpe13g01196 Bpe-Chr13:17326376 Bpe07g00231 Bpe-Chr7:1639176 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01196 K16055 - nnu:104605340 1304.27