Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe13g01202 ATGGTTATGGGTATTGCAGCGAAGCCATGCGACTCCTGCAAATTGGCGCCGGCAGTTTTGTTTTGTCGGAGTCACGCCGTTTTCCTCTGCATCATGTGCGATGCAGATATTCACAAGCTTGGCCTCCGGCACGAGCGTGTCTGGATGTGTGAGGTCTGCGAGCAAGCTCCGGCTGTCGTTACCTGCAAAGCCGATGCTGCCACTCTCTGCGTCACATGCGACGCGGATATCCACTCCGCCAATCCTCTCGCCCGCCGCCACGAGCGGGTCCCCGTGGAGTCGTTTTTCAACTCAGCCGAGTCGATGATAAAGTCGTCTTCTGCTGCCTTCAACTTCCTCGTTTCTCATGGAGCTGATATTGGAATCGCTGGCGGTGGCCGGAAGGACGACGGTGAGGCGGCGTCGTGGCTTCTAATGAACCAAAACCTCAAGTCAAAGCTAATGGAGGGAGAGCAATTGAAGTCTGAAGATATGTTTTTCTCGGAAACGGACTCGTTTATCGATTTTGAATATTCCAATCCAATCACCGGAAATGACAGCGTCGTTCCTGTTCAGACTAAACAAATATCGGCAGCGGCGATCAATCAATCCAACGAAAACTGTTTCGATATCGACTTCTGCCAATCCAAACTGAACTCATTTAGCTACCCATCTCACACAGTAAGCCATAGCATTTCTTCTTCGTCCTTAGATGTCGGAATTGTTCCAGACGGGGGAAACTCTTTCTCCGACATATCGCATTCTTTCGGCCGCAATGTTGTCGAACCGTGCATATCGGTGTCTGCGACGACGGAACAGGCGGTGCCGCTGTGTGGATTAGATCGGGAGGCGAAGGTTTTAAGGTACAAAGAGAAGAAGAAGAACCGGAGGTTCGAGAAAACTATACGCTACGCCTCAAGAAAGGCTTACGCAGAAACTCGGCCGAGAATTAAAGGCCGATTTGCTAAGCGAAACGACTTCCACTCCGACGTCGACCGAATGTACAGTTCGGTTTCGGCTAATTTCCACGCCGAGCATCAATACGGCATCGTTCCGTCATTCTGA 1044 51.05 MVMGIAAKPCDSCKLAPAVLFCRSHAVFLCIMCDADIHKLGLRHERVWMCEVCEQAPAVVTCKADAATLCVTCDADIHSANPLARRHERVPVESFFNSAESMIKSSSAAFNFLVSHGADIGIAGGGRKDDGEAASWLLMNQNLKSKLMEGEQLKSEDMFFSETDSFIDFEYSNPITGNDSVVPVQTKQISAAAINQSNENCFDIDFCQSKLNSFSYPSHTVSHSISSSSLDVGIVPDGGNSFSDISHSFGRNVVEPCISVSATTEQAVPLCGLDREAKVLRYKEKKKNRRFEKTIRYASRKAYAETRPRIKGRFAKRNDFHSDVDRMYSSVSANFHAEHQYGIVPSF 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 17372137 17373271 - Bpe010874.1 Bpe13g01202 113982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe13g01202 347 Pfam CCT motif 275 317 IPR010402 GO:0005515
Bpe13g01202 347 ProSiteProfiles Zinc finger B-box type profile. 5 49 IPR000315 GO:0008270
Bpe13g01202 347 CDD Bbox1_BBX-like 9 49 - -
Bpe13g01202 347 ProSiteProfiles CCT domain profile. 275 317 IPR010402 GO:0005515
Bpe13g01202 347 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 5 347 IPR045281 GO:0009909
Bpe13g01202 347 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 5 347 - -
Bpe13g01202 347 Pfam B-box zinc finger 8 47 IPR000315 GO:0008270
Bpe13g01202 347 Pfam B-box zinc finger 47 92 IPR000315 GO:0008270
Bpe13g01202 347 ProSiteProfiles Zinc finger B-box type profile. 45 92 IPR000315 GO:0008270
Bpe13g01202 347 CDD Bbox1_BBX-like 50 92 - -
Bpe13g01202 347 SMART bboxneu5 5 49 IPR000315 GO:0008270
Bpe13g01202 347 SMART bboxneu5 50 92 IPR000315 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00686 Bpe13g01202 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01272 Bpe-Chr2:16126093 Bpe13g01202 Bpe-Chr13:17372137 2.50E-86 dispersed
Bpe13g01202 Bpe-Chr13:17372137 Bpe14g00128 Bpe-Chr14:1750730 5.70E-75 dispersed
Bpe13g01202 Bpe-Chr13:17372137 Bpe08g00686 Bpe-Chr8:7847358 1.98E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22357 PF00643 zf-B_box 1.90E-06 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe13g01202 - - zju:107415202 438.728